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RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_1
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

2..103
DNA (102bp) protein (34aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_2
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(204..893)
DNA (690bp) protein (230aa)
two component transcriptional regulator Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Two component transcriptional regulator, winged helix family id=3647639 bin=GWA2_Elusimicrobia_56_46 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ArsR family transcriptional regulator
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_3
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(941..1381)
DNA (441bp) protein (147aa)
cyclic nucleotide-binding protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
TrkA-N:sodium/hydrogen exchanger id=4489152 bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium F41-01 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cyclic nucleotide-binding protein
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_4
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1418..2878)
DNA (1461bp) protein (487aa)
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Pilus retraction protein PilT id=2237701 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
pilus retraction protein PilT
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_5
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

3017..3655
DNA (639bp) protein (213aa)
TetR family transcriptional regulator Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Putative transcriptional regulatory protein, TetR family id=2148408 bin=GWB2_Elusimicrobium_63_22 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
TetR family transcriptional regulator
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_6
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3720..3944)
DNA (225bp) protein (75aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_7
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3974..4372)
DNA (399bp) protein (133aa)
secondary thiamine-phosphate synthase enzyme Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
UPF0047 protein yugU id=4981040 bin=GWA2_Elusi_like_61_42 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
secondary thiamine-phosphate synthase enzyme
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_8
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4398..4844)
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
hypothetical protein id=1870556 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_9
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4865..5215)
DNA (351bp) protein (117aa)
FKBP-type peptidylprolyl isomerase Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Peptidyl-prolyl cis-trans isomerase id=2470562 bin=GWC2_Elusimicrobia_51_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
FKBP-type peptidylprolyl isomerase
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_10
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5259..5636)
DNA (378bp) protein (126aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
hypothetical protein id=2741219 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_11
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

5887..7080
DNA (1194bp) protein (398aa)
putative 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
putative 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate CoA ligase id=3758353 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_12
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

7101..8015
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035C740F
type II secretory pathway, component PulF Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
General secretion pathway protein F
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_13
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8100..8699)
DNA (600bp) protein (200aa)
pentapeptide repeat-containing protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
pentapeptide repeat-containing protein id=1710532 bin=GWA2_Elusimicrobia_51_34 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
pentapeptide repeat-containing protein
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_14
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8705..9295)
DNA (591bp) protein (197aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_15
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

9443..10999
DNA (1557bp) protein (519aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3685134 bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_16
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

11006..11233
DNA (228bp) protein (76aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Uncharacterized conserved protein DUF167 id=1707044 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_17
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

11248..11883
DNA (636bp) protein (212aa)
DSBA oxidoreductase Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Na+/H+ antiporter, NhaA family protein, partial id=1707045 bin=GWA2_Elusimicrobia_56_46 species=candidate division TM7 single-cell isolate TM7b genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
DSBA oxidoreductase
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_18
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

11891..12259
DNA (369bp) protein (123aa)
Methylamine utilization protein MauE Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
DoxX id=1707046 bin=GWA2_Elusimicrobia_56_46 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Methylamine utilization protein MauE
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_19
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

12252..13100
DNA (849bp) protein (283aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
hypothetical protein id=1707047 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_20
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

13234..13647
DNA (414bp) protein (138aa)
response regulator receiver sensor signal transduction histidine kinase Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Response regulator receiver modulated diguanylate cyclase id=3258986 bin=GWC2_Elusimicrobia_64_44 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
diguanylate cyclase
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_21
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

13652..15289
DNA (1638bp) protein (546aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
TPR repeat-containing protein id=4981013 bin=GWA2_Elusi_like_61_42 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_22
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

15352..16536
DNA (1185bp) protein (395aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
hypothetical protein id=2049850 bin=GWB2_Elusimicrobium_63_22 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_23
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

16554..17879
DNA (1326bp) protein (442aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
Nucleotide sugar dehydrogenase id=1707050 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ugd; UDP-glucose 6-dehydrogenase
RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_1189_24
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

18112..19041
DNA (930bp) protein (310aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
dTDP-glucose 4,6-dehydratase id=4981010 bin=GWA2_Elusi_like_61_42 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
dTDP-glucose 4,6-dehydratase
Displaying 24 items

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