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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YBB5_9BACT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

539..775
DNA (237bp) protein (79aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(757..2658)
DNA (1902bp) protein (634aa)
DNA topoisomerase type IIA subunit B region 2 domain protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z292_DESAT
DNA topoisomerase type IIA subunit B region 2 domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3524..4537)
DNA (1014bp) protein (338aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFK7_DESPD
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
molybdenum cofactor biosynthesis protein A
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4908..5972
DNA (1065bp) protein (355aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57) Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=2201841 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5969..6469
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJU0_9DELT
hypothetical protein; K09928 hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6475..7344
DNA (870bp) protein (290aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z167_DESAT
dimethyladenosine transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7349..8512
DNA (1164bp) protein (388aa)
Fe-dependent oxidoreductase, alcohol dehydrogenase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PC02_DESSD
Fe-dependent oxidoreductase, alcohol dehydrogenase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fe-dependent oxidoreductase, alcohol dehydrogenase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..9395)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDD7_DESPD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9572..9922
DNA (351bp) protein (117aa)
Putative uncharacterized protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Putative uncharacterized protein id=4791941 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10272..10727)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0T8_DESAT
hypothetical protein; K07803 zinc resistance-associated protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11111..12949
DNA (1839bp) protein (613aa)
signal transduction histidine kinase, nitrogen specific, NtrB; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z162_DESAT
signal transduction histidine kinase, nitrogen specific, NtrB
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13113..14369)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z161_DESAT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14510..15367)
DNA (858bp) protein (286aa)
protein-(glutamine-N5) methyltransferase, release factor-specific; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Release factor glutamine methyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z160_DESAT
protein-(glutamine-N5) methyltransferase, release factor-specific
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15369..15539
DNA (171bp) protein (57aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15529..16596)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJH0_DESPD
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
peptide chain release factor 1 (bRF-1)
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16794..17006)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z158_DESAT
ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein L31
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..18406)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z157_DESAT
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
transcription termination factor Rho
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19013..20365
DNA (1353bp) protein (451aa)
RNA polymerase sigma factor n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NXM5_9DELT
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RNA polymerase, sigma 70 subunit, RpoD subfamily
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20527..23013
DNA (2487bp) protein (829aa)
DNA internalization-related competence protein ComEC/Rec2 (Fragment) n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NIU7_9DELT
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA internalization-like competence protein ComEC/Rec2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23033..24118)
DNA (1086bp) protein (362aa)
Pilus retraction protein PilT n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NXM7_9DELT
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
twitching motility protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24449..25327
DNA (879bp) protein (293aa)
PHP domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2J2_DESAT
PHP domain protein; K07053 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PHP domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25500..26885
DNA (1386bp) protein (462aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2J3_DESAT
Fis family transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fis family transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26964..27143
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNH7_9DELT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27151..28398
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH56_AZOBR
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
NAD(FAD)-utilizing dehydrogenase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28607..30370)
DNA (1764bp) protein (588aa)
formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Formate--tetrahydrofolate ligase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FAV3_9DELT
formate--tetrahydrofolate ligase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30469..31425)
DNA (957bp) protein (319aa)
thymidylate synthase complementing protein ThyX; K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Thymidylate synthase complementing protein ThyX n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1W7_DESAT
thymidylate synthase complementing protein ThyX
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31450..32664)
DNA (1215bp) protein (405aa)
cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1W8_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32664..33497)
DNA (834bp) protein (278aa)
Nitrogen fixation protein NifU n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJG0_9DELT
Fe-S cluster assembly protein NifU; K13819 NifU-like protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fe-S cluster assembly protein NifU
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_114_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33852..35681)
DNA (1830bp) protein (610aa)
UvrABC system protein C n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RAY0_DESPD
Excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Excinuclease ABC subunit C
Displaying items 1-30 of 51 in total

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