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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
RNA polymerase sigma factor RpoD n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z8_DESAT
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RNA polymerase, sigma 70 subunit, RpoD subfamily
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

811..1926
DNA (1116bp) protein (372aa)
DNA protecting protein DprA n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z7_DESAT
DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA protecting protein DprA
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..4545
DNA (2286bp) protein (762aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=4 Tax=delta proteobacterium MLMS-1 RepID=Q1NMN5_9DELT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4710..5483)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TZJ4_9DELT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5616..5969
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NMN4_9DELT
hypothetical protein; K02388 flagellar basal-body rod protein FlgC Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6003..6293
DNA (291bp) protein (97aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6182..7483)
DNA (1302bp) protein (434aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Dihydroorotase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z4_DESAT
dihydroorotase, multifunctional complex type
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7485..8417)
DNA (933bp) protein (311aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z3_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8711..9334)
DNA (624bp) protein (208aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z2_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..11071
DNA (1095bp) protein (365aa)
Type IV pilus assembly protein PilM n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6N6_DESSD
type IV pilus assembly protein PilM Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
type IV pilus assembly protein PilM
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11076..11627
DNA (552bp) protein (184aa)
Fimbrial assembly family protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z0_DESAT
Fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fimbrial assembly family protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11649..12284
DNA (636bp) protein (212aa)
Pilus assembly protein PilO n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Y9_DESAT
Pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Pilus assembly protein PilO
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12417..12944
DNA (528bp) protein (176aa)
Pilus assembly protein, PilP n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCA4_DESSD
Pilus assembly protein, PilP Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Pilus assembly protein, PilP
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12944..14926
DNA (1983bp) protein (661aa)
Type II secretory pathway, component HofQ n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PLN6_DESSD
type II secretory pathway, component HofQ Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
type II secretory pathway, component HofQ
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15000..16685
DNA (1686bp) protein (562aa)
Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Y6_DESAT
type II and III secretion system protein; K12282 MSHA biogenesis protein MshL Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
type II and III secretion system protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16773..17255)
DNA (483bp) protein (161aa)
Protein export chaperone SecB n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ59_9DELT
protein-export protein SecB; K03071 preprotein translocase subunit SecB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
protein-export protein SecB
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17453..20290)
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Y3_DESAT
excinuclease ABC, A subunit; K03701 excinuclease ABC subunit A Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
excinuclease ABC, A subunit rbh
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20383..21714)
DNA (1332bp) protein (444aa)
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NND3_9DELT
sun protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21790..22560)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDB3_DESSD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23094..23402)
DNA (309bp) protein (103aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PemK-like protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ25_9DELT
transcriptional modulator of MazE/toxin, MazF
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23396..23638)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJY0_9DELT
SpoVT/AbrB domain-containing protein; K07172 antitoxin Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
SpoVT/AbrB domain-containing protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23748..24047)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037E80E2
transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24192..24368)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036338CA
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24358..24825)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H6P7_MICAE
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24929..25402)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000381E01A
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 25 items

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