ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_18

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(16329..16961)

Top 3 Functional Annotations

Value Algorithm Source
signal transduction histidine kinase, nitrogen specific, NtrB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 425
  • Evalue 6.20e-116
Sensory box protein id=4214116 bin=GWF2_Lentisphaerae_57_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 206.0
  • Bit_score: 182
  • Evalue 5.00e-43
signal transduction histidine kinase, nitrogen specific, NtrB similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 180.0
  • Bit_score: 167
  • Evalue 4.70e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAATACAGAGGAATCAAGCAAGGCCTACCCCTTTCTGGAACGAGCTGAACAGGTGTTCGGCCTGGCCACCAAGCTTACCGGCCAGCTTATTTCTTTCTCCCCCGGCGGCAACCTGCAACCGATAGATATCCACCCGGCAAACCCTCTCAAGGAAGAGGCCCTGTCCACCTTGGCAGGTTCGGGGCTGACGGCTGAATTCGACTTGGCCGAGAACCTCTGGCCCATCACCGTCGATCCTTCTCAATTCCGCAACGTCATAAAACATATGGCGCTGAATGCCCTAGAGGCCATGCCCTTGCAATCAGGCGGCACACTCCTCATAAAAGCAGCCAATGAATCCCTACCGGAGAATCATGCAAAGCACCCTACACTTCCTCCGGGCTGCTATGTGAAGATTTCGATCCAGGACTATGGCTGCGGAATCAGCAAAGAGAACCTGCCCCGCATCTTTGACCCCTATTTTTCCACCAAGCAACTTGGTGCCCAGAAGGGCATGGGGCTCGGGCTTACCCTGTGCGATTCGATCATCAGAAAGCACGGCGGCGCGATTACGGTGGAATCGGAACCAGGCAAGGGAACCACCTTTGATATCTACCTCCCCGCCGCTGCGGAAAAGGCTGAATCCAAATAA
PROTEIN sequence
Length: 211
MNTEESSKAYPFLERAEQVFGLATKLTGQLISFSPGGNLQPIDIHPANPLKEEALSTLAGSGLTAEFDLAENLWPITVDPSQFRNVIKHMALNALEAMPLQSGGTLLIKAANESLPENHAKHPTLPPGCYVKISIQDYGCGISKENLPRIFDPYFSTKQLGAQKGMGLGLTLCDSIIRKHGGAITVESEPGKGTTFDIYLPAAAEKAESK*