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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(630..1310)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHW2_9BACT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1716..2003)
DNA (288bp) protein (96aa)
HTH n=23 Tax=Pseudomonas aeruginosa RepID=G8CP74_PSEAI
putative transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
addiction module antitoxin
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2003..2299)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes RepID=Q9XAX7_PSEAC
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2573..2836)
DNA (264bp) protein (88aa)
Putative addiction module antidote protein, CC2985 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRJ2_9BACT
addiction module antidote protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
addiction module antidote protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2899..3744)
DNA (846bp) protein (282aa)
ABC-3 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NL04_9DELT
ABC-type Mn2+/Zn2+ transport system, permease component Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ABC-type Mn2+/Zn2+ transport system, permease component
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4510)
DNA (780bp) protein (260aa)
ATPase component of Mn/Zn ABC-type transporter n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9S9_DESSD
ATPase component of Mn/Zn ABC-type transporter Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ATPase component of Mn/Zn ABC-type transporter
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4521..5432)
DNA (912bp) protein (304aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YNS1_9BACT
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
periplasmic solute binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5420..5695)
DNA (276bp) protein (92aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Uncharacterized protein id=3743760 bin=GWF2_Lentisphaerae_52_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5917..6111
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJX7_DESPS
tatE; Sec-independent protein translocase TatE; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
tatE; Sec-independent protein translocase TatE
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6160..6378
DNA (219bp) protein (73aa)
Sec-independent protein translocase protein TatA n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0X4_9DELT
twin arginine-targeting protein translocase, TatA/E family Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
twin arginine-targeting protein translocase, TatA/E family
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7007)
DNA (534bp) protein (178aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C606_DESTA
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7196..8269)
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z264_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8614..11679
DNA (3066bp) protein (1022aa)
multi-sensor hybrid histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Signal transduction histidine kinase, nitrogen specific, NtrB id=2109839 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
multi-sensor hybrid histidine kinase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11866..12285)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJT8_DESSD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..13280)
DNA (972bp) protein (324aa)
Putative transcriptional regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P4Y8_DESSD
putative transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
putative transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13508..15391
DNA (1884bp) protein (628aa)
Radical SAM n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NJI9_9DELT
Radical SAM domain protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Radical SAM domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15305..16375)
DNA (1071bp) protein (357aa)
Auxin Efflux Carrier n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z058_DESAT
Auxin Efflux Carrier; K07088 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Auxin Efflux Carrier
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16329..16961)
DNA (633bp) protein (211aa)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Sensory box protein id=4214116 bin=GWF2_Lentisphaerae_57_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
signal transduction histidine kinase, nitrogen specific, NtrB
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17011..19077)
DNA (2067bp) protein (689aa)
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Diguanylate cyclase with PAS/PAC sensor id=2103772 bin=GWD2_Desulfuromonadales_54_10 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..21758)
DNA (2592bp) protein (864aa)
Multi-sensor Hybrid Histidine Kinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZD0_9PROT
two component protein (response regulator/sensory box histidine kinase) Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
two component protein (response regulator/sensory box histidine kinase)
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22020..22337
DNA (318bp) protein (106aa)
Nitrogen regulatory protein P-II n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5E0_DESAT
nitrogen regulatory protein P-II Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
nitrogen regulatory protein P-II
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22378..22851
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5E1_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22927..24210)
DNA (1284bp) protein (428aa)
Ketose-bisphosphate aldolase class-II n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1D6_DESAT
ketose-bisphosphate aldolase class-II Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ketose-bisphosphate aldolase class-II
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24550..25341)
DNA (792bp) protein (264aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z1Q2_PARAH
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25898..28438)
DNA (2541bp) protein (847aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G513_GEOUR
multi-sensor hybrid histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
multi-sensor hybrid histidine kinase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28435..28995)
DNA (561bp) protein (187aa)
putative CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
CheW protein id=4850212 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
putative CheW protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29055..31748)
DNA (2694bp) protein (898aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DY44_9GAMM
methyl-accepting chemotaxis protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
methyl-accepting chemotaxis protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31782..31886)
DNA (105bp) protein (35aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31900..32217)
DNA (318bp) protein (106aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_292_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32701..35652
DNA (2952bp) protein (984aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J162_NOSP7
multi-sensor hybrid histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
multi-sensor hybrid histidine kinase
Displaying items 1-30 of 32 in total

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