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RBG_16_scaffold_79008_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_79008_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..968)
DNA (966bp) protein (322aa)
thrC1; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase id=1835783 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_79008_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2631..2882)
DNA (252bp) protein (84aa)
SirA family protein id=2075509 bin=GWB2_Nitrospirae_rel_47_37 species=Thermocrinis albus genus=Thermocrinis taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
SirA family protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_79008_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2884..4191)
DNA (1308bp) protein (436aa)
homoserine dehydrogenase (HDH): ThrA, MetL (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase id=2075507 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_79008_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4323..4865
DNA (543bp) protein (181aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_79008_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4937..5650
DNA (714bp) protein (238aa)
Hamp domain/gaf domain/hd domain protein id=3493870 bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
metal dependent phosphohydrolase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_79008_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5690..6868)
DNA (1179bp) protein (393aa)
hypothetical aminotransferase YfdZ (EC:2.6.1.-); K14261 alanine-synthesizing transaminase [EC:2.6.1.-] rbh
Hypothetical aminotransferase YfdZ n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIE3_THEYD rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 6 items

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