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RBG_16_scaffold_10902_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_10902_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..157
DNA (156bp) protein (52aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(440..1183)
DNA (744bp) protein (248aa)
Two component transcriptional regulator, winged helix family id=2430243 bin=GWC2_Deltaproteobacteria_55_46 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
winged helix family two component transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1202..1402)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5F1_DESAT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1426..1767)
DNA (342bp) protein (114aa)
Cupin domain protein id=4201397 bin=GWC2_Deltaproteobacteria_56_8 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2434..2523)
DNA (90bp) protein (30aa)
Putative Metal-binding protein smbP n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB34_9BACT
putative metal-binding protein smbP
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_6
unknown

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comp(2477..2785)
DNA (309bp) protein (103aa)

This feature has no annotations

RBG_16_scaffold_10902_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2904..3530)
DNA (627bp) protein (209aa)
Uncharacterized protein id=1872462 bin=GWB2_Proteobacteria_55_19 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3533..3961)
DNA (429bp) protein (143aa)
Putative transcriptional regulator id=4016693 bin=GWC2_Syntrophobacterales_56_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Fur family ferric uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..5384)
DNA (1248bp) protein (416aa)
Sodium/hydrogen exchanger n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5U4_METSW rbh
sodium/hydrogen exchanger rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5393..5830
DNA (438bp) protein (146aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6172..6444
DNA (273bp) protein (91aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6511..7041
DNA (531bp) protein (177aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJ11_THEYD
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7407..7739
DNA (333bp) protein (111aa)
Gamma-glutamyl phosphate reductase id=4877810 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
gamma-glutamyl phosphate reductase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7729..8718
DNA (990bp) protein (330aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase id=4877810 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_15
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8839..9117
DNA (279bp) protein (93aa)
Transmembrane protein id=1283786 bin=GWE1_Burkholderiales_65_30 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
transmembrane protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_16
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9314..9574
DNA (261bp) protein (87aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10902_curated_17
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9626..10369)
DNA (744bp) protein (248aa)
ATPase P (EC:3.6.3.8)
ATPase id=4780005 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 17 items

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