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RBG_16_scaffold_42029_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_42029_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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789..1556
DNA (768bp) protein (256aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] rbh
Probable glycine dehydrogenase [decarboxylating] subunit 1 id=4920913 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1553..3025
DNA (1473bp) protein (491aa)
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2) (EC:1.4.4.2) rbh
Probable glycine dehydrogenase [decarboxylating] subunit 2 id=4920912 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3482..3745)
DNA (264bp) protein (88aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4361..4549
DNA (189bp) protein (63aa)
Cytochrome c, class IC id=4920910 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4512..5540
DNA (1029bp) protein (343aa)
Uncharacterized protein id=4920909 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7247..7690)
DNA (444bp) protein (148aa)
GTPase obg id=4920884 bin=GWC2_Deltaproteobacteria_42_51 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8656..8850)
DNA (195bp) protein (65aa)
50S ribosomal protein L21 id=4920880 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9099..9497)
DNA (399bp) protein (133aa)
Uncharacterized protein id=4920878 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10267..10902
DNA (636bp) protein (212aa)
Transcriptional regulator, LuxR family id=2213313 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
LuxR family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_42029_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11215..11376
DNA (162bp) protein (54aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 10 items

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