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RBG_16_scaffold_20948_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_20948_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..317
DNA (315bp) protein (105aa)
tRNA-processing RNAse BN (EC:3.1.-.-); K07058 membrane protein
Putative tRNA-processing ribonuclease BN id=1708182 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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610..1050
DNA (441bp) protein (147aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1383..1889
DNA (507bp) protein (169aa)
Putative Transferase, hexapeptide repeat protein id=2009614 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
yrdA; putative transferase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1974..2591
DNA (618bp) protein (206aa)
MotA/TolQ/ExbB proton channel id=3247643 bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
motA/TolQ/ExbB proton channel
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2661..3077
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR id=2009550 bin=GWB2_Proteobacteria_55_19 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3074..4099
DNA (1026bp) protein (342aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
PppGpp 5'-phosphohydrolase and exopolyphosphatase, putative id=4574249 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4171..4380)
DNA (210bp) protein (70aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4414..4674)
DNA (261bp) protein (87aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_20948_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4699..5271)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V9E3_9RHOB
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 9 items

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