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RBG_16_scaffold_14682_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_14682_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..260)
DNA (258bp) protein (86aa)
Protein translocase subunit SecY id=4627882 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1407..1913)
DNA (507bp) protein (169aa)
30S ribosomal protein S5 id=4627878 bin=GWC2_Deltaproteobacteria_42_51 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2025..2390)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 id=4627876 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2500..3060)
DNA (561bp) protein (187aa)
50S ribosomal protein L6 id=4627874 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3136..3534)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 id=4627872 bin=GWC2_Deltaproteobacteria_42_51 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3879..4421)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 id=4627870 bin=GWC2_Deltaproteobacteria_42_51 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4421..4750)
DNA (330bp) protein (110aa)
50S ribosomal protein L24 id=4627868 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4772..5140)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=4627866 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5141..5404)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 id=4627864 bin=GWC2_Deltaproteobacteria_42_51 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5408..5608)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 id=4627862 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5605..5775)
DNA (171bp) protein (57aa)
50S ribosomal protein L16 id=4627859 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6119..6766)
DNA (648bp) protein (216aa)
30S ribosomal protein S3 id=4627857 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6779..7111)
DNA (333bp) protein (111aa)
50S ribosomal protein L22 id=4627855 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_14682_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7178..7477)
DNA (300bp) protein (100aa)
Ribosomal protein S19 id=4627853 bin=GWC2_Deltaproteobacteria_42_51 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 14 items

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