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RBG_16_scaffold_69432_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_69432_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(116..610)
DNA (495bp) protein (165aa)
shikimate 5-dehydrogenase I alpha; K00014 shikimate dehydrogenase [EC:1.1.1.25]
shikimate kinase id=2231241 bin=GWB2_Ignavibacteria_35_12 species=Peptoniphilus rhinitidis genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(603..1247)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B7562E
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1234..2373)
DNA (1140bp) protein (380aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] rbh
3-dehydroquinate synthase id=3429132 bin=GWF2_Bacteroidetes_38_335 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2370..3185)
DNA (816bp) protein (272aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase id=24430563 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3496..3666)
DNA (171bp) protein (57aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7INJ4_DESMD
Zn-dependent hydrolase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4021..4536)
DNA (516bp) protein (172aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7INJ4_DESMD
Zn-dependent hydrolase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4704..6473
DNA (1770bp) protein (590aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=14425553 bin=bin1_lowGC species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP rbh
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6556..7080
DNA (525bp) protein (175aa)
Isopropylmalate/homocitrate/citramalate synthases id=4604729 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
pyruvate carboxyltransferase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_69432_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7166..7318
DNA (153bp) protein (51aa)
Pyruvate carboxyltransferase id=2579299 bin=GWF1_Spirochaetes_51_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
pyruvate carboxyltransferase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 10 items

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