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RBG_16_scaffold_60280_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_60280_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..611)
DNA (609bp) protein (203aa)
Cytochrome c biogenesis protein CcdA id=4628307 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
ccdA; cytochrome c biogenesis protein CcdA; K06196 cytochrome c-type biogenesis protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(608..1210)
DNA (603bp) protein (201aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4628309 bin=GWC2_Deltaproteobacteria_42_51 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
alkyl hydroperoxide reductase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1210..1815)
DNA (606bp) protein (202aa)
Putative thioredoxin family protein id=4628419 bin=GWC2_Deltaproteobacteria_42_51 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
resA; thiol-disulfide oxidoreductase ResA
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1915..2760)
DNA (846bp) protein (282aa)
Cytochrome c biogenesis protein id=4628421 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
cytochrome c biogenesis protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2757..4286)
DNA (1530bp) protein (510aa)
Putative Cytochrome c biogenesis protein, ResB-like id=4628423 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
putative cytochrome c biogenesis protein, ResB-like; K07399 cytochrome c biogenesis protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4341..4943)
DNA (603bp) protein (201aa)
Peptidase S1 and S6 chymotrypsin/Hap id=3953088 bin=GWC2_Deltaproteobacteria_42_51 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4955..5392)
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=3953003 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_60280_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..5921)
DNA (390bp) protein (130aa)
Electron transport complex protein RnfB id=4815623 bin=GWC2_Deltaproteobacteria_55_46 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
rnfB; ferredoxin
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 8 items

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