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RBG_16_scaffold_9820_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_9820_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1179)
DNA (1179bp) protein (393aa)
molybdopterin oxidoreductase Fe4S4 region; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-]
Molybdopterin oxidoreductase id=3302026 bin=GWF2_Ignavibacteria_35_20 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1197..1754)
DNA (558bp) protein (186aa)
Class III cytochrome c domain protein id=3302027 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1813..2673)
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=3846227 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
cytochrome c, 5 heme-binding sites
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2673..3764)
DNA (1092bp) protein (364aa)
Cytochrome b id=3846229 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
cytochrome b/b6; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3768..4178)
DNA (411bp) protein (137aa)
Menaquinol oxidoreductase complex Cbc3, iron-sulfur cluster-binding subunit, putative id=3846231 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cytochrome b/b6 complex, iron-sulfur subunit
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4205..4297)
DNA (93bp) protein (31aa)
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE id=3721322 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_7
unknown

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4338..5114
DNA (777bp) protein (259aa)

This feature has no annotations

RBG_16_scaffold_9820_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5195..6595
DNA (1401bp) protein (467aa)
Glucose inhibited division protein A id=3721325 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
gidA2; glucose inhibited division protein A; K07137 rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6633..7289
DNA (657bp) protein (219aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase id=3721382 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_9820_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7755..8021)
DNA (267bp) protein (89aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate, phosphate dikinase id=4127251 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 10 items

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