ggKbase home page

RBG_16_scaffold_21785_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_21785_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1094
DNA (1092bp) protein (364aa)
phosphodiesterase/alkaline phosphatase D id=14431402 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
phosphodiesterase/alkaline phosphatase D
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1091..1420
DNA (330bp) protein (110aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_3
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1593..1748
DNA (156bp) protein (52aa)
Adenine specific DNA methylase Mod n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5T0_PELTS
Mod; adenine specific DNA methylase Mod
Tax=GWA2_Deltaproteobacteria_54_12_curated
RBG_16_scaffold_21785_curated_4
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1917..3200
DNA (1284bp) protein (428aa)
DNA methylase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B55607 rbh
DNA methylase N-4/N-6 domain-containing protein rbh
Tax=GWA2_Deltaproteobacteria_54_12_curated
RBG_16_scaffold_21785_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3204..3920
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5T1_PELTS
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4062..5702
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5T1_PELTS rbh
hypothetical protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6728
DNA (1011bp) protein (337aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..7240
DNA (267bp) protein (89aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7403..9280
DNA (1878bp) protein (626aa)
AAA ATPase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE94_XANP2
ATPase AAA
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9277..9594
DNA (318bp) protein (106aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9598..10056
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3046617 bin=GWF2_Melainabacteria_37_15 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10053..10211
DNA (159bp) protein (53aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10201..10431
DNA (231bp) protein (77aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10428..10652
DNA (225bp) protein (75aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_15
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10649..10822
DNA (174bp) protein (58aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_16
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11402
DNA (312bp) protein (104aa)
DNA binding domain-containing protein id=4779962 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_17
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11565..11765
DNA (201bp) protein (67aa)
id=3339073 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_21785_curated_18
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11740..12696
DNA (957bp) protein (319aa)
integrase family protein id=4779963 bin=GWA2_OP3_52_12 species=Citromicrobium sp. JLT1363 genus=Citromicrobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors rbh
phage integrase family protein
Tax=GWA2_Deltaproteobacteria_54_12_curated
Displaying 18 items

View Taxonomy