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RBG_16_scaffold_46599_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_46599_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..254
DNA (252bp) protein (84aa)
Putative uncharacterized protein id=3637672 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(386..574)
DNA (189bp) protein (63aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(623..871)
DNA (249bp) protein (83aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1300..1932
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=4876748 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2003..2533
DNA (531bp) protein (177aa)
hypothetical protein id=3472292 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2593..2862)
DNA (270bp) protein (90aa)
lipoprotein signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000381A803
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3155..4216)
DNA (1062bp) protein (354aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=15193049 bin=GWC2_NOV_55_46 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4775..5146
DNA (372bp) protein (124aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5438..6118
DNA (681bp) protein (227aa)
Alpha-L-glutamate ligases, RimK family n=1 Tax=Cronobacter universalis NCTC 9529 RepID=K8DD35_9ENTR
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_46599_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6237..6398)
DNA (162bp) protein (54aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJN3_CAUST
LuxR family two component transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 10 items

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