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RBG_16_scaffold_101049_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_101049_curated_1
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(293..697)
DNA (405bp) protein (135aa)
Two-component response regulator id=2187709 bin=GWE2_RBX1_39_32 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_2
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(731..946)
DNA (216bp) protein (72aa)
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4E5_9BACT
two-component response regulator
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_3
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(973..2445)
DNA (1473bp) protein (491aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS sensor protein id=3838275 bin=GWA2_Ignavibacteriae_54_16_partial species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_4
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2634..2735)
DNA (102bp) protein (34aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..3596)
DNA (840bp) protein (280aa)
Tad secretion system, secretion accessory protein n=1 Tax=blood disease bacterium R229 RepID=G2ZPU3_9RALS
tadC; tad secretion system, secretion accessory protein; K12511 tight adherence protein C
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_6
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3700..4071)
DNA (372bp) protein (124aa)
Type II secretion system protein n=2 Tax=Ralstonia pickettii RepID=B2U6N4_RALPJ
type II secretion system protein; K12510 tight adherence protein B
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_7
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4205..4420
DNA (216bp) protein (72aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_8
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4727..6163)
DNA (1437bp) protein (479aa)
Type II secretion system protein E n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WWK1_METML rbh
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_9
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6164..7375)
DNA (1212bp) protein (404aa)
response regulator receiver protein; K02282 pilus assembly protein CpaE id=14429105 bin=bin3_NC10 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
response regulator receiver protein; K02282 pilus assembly protein CpaE
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_10
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7557..7982)
DNA (426bp) protein (142aa)
Flp pilus assembly protein CpaB id=1718232 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
flp pilus assembly protein; K02279 pilus assembly protein CpaB
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_11
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8180..8284
DNA (105bp) protein (35aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_12
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8450..9004)
DNA (555bp) protein (185aa)
flp pilus assembly protein, protease; K02278 prepilin peptidase CpaA [EC:3.4.23.43] id=15193692 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
Flp pilus assembly protein, protease CpaA
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_13
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9107..9211)
DNA (105bp) protein (35aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_14
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9305..9478)
DNA (174bp) protein (58aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_101049_curated_15
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10441..10680
DNA (240bp) protein (80aa)
Tax=RBG_16_Desulfobacca_58_9_curated
Displaying 15 items

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