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RBG_16_scaffold_20337_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_20337_curated_1
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(70..354)
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=4208891 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
cytoplasmic protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_2
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(582..2069)
DNA (1488bp) protein (496aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEG1_DESAR rbh
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_3
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2200..2418
DNA (219bp) protein (73aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_4
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2661..3239
DNA (579bp) protein (193aa)
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=planctomycete KSU-1 RepID=I3IHV5_9PLAN
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3386..4351
DNA (966bp) protein (322aa)
Histone deacetylase superfamily n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJU8_DESAR rbh
histone deacetylase superfamily protein rbh
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_6
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4759..4962
DNA (204bp) protein (68aa)
cspA; Cold shock protein, DNA binding
Cold-shock DNA-binding protein family id=4796256 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_7
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4882..5127)
DNA (246bp) protein (82aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_8
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6083..7153
DNA (1071bp) protein (357aa)
Signal transduction histidine kinase id=2276827 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PAS/PAC sensor signal transduction histidine kinase
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_9
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7461..8108
DNA (648bp) protein (216aa)
Two-component response regulator id=3070217 bin=GWF2_Planctomycetes_50_10 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
two-component response regulator
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_10
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8548..9642
DNA (1095bp) protein (365aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_11
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9716..10975
DNA (1260bp) protein (420aa)
Putative uncharacterized protein id=3653768 bin=GWF2_Syntrophobacterales_56_9 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
PAS/PAC sensor protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_12
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11140..12243
DNA (1104bp) protein (368aa)
Copper amine oxidase domain protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VWN5_DESAS
copper amine oxidase domain-containing protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_20337_curated_13
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12340..12729
DNA (390bp) protein (130aa)
Tax=RBG_16_Desulfobacca_58_9_curated
Displaying 13 items

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