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RBG_13_scaffold_62922_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_62922_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..700)
DNA (699bp) protein (233aa)
Radical SAM superfamily protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQU5_SYNAS
radical SAM protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(678..1862)
DNA (1185bp) protein (395aa)
Radical SAM domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EVX8_9DELT rbh
Radical SAM domain-containing protein rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1954..3474)
DNA (1521bp) protein (507aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] rbh
Uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase id=4717297 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3471..3950)
DNA (480bp) protein (160aa)
hydroxymethylbilane synthase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase id=1999228 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4204..5493)
DNA (1290bp) protein (430aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] rbh
Glutamyl-tRNA reductase id=4531935 bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5581..6132)
DNA (552bp) protein (184aa)
cytochrome c biogenesis protein id=14624627 bin=bin5_DeltaP species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cytochrome c assembly protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7459..7929)
DNA (471bp) protein (157aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Geobacter metallireducens RepID=HIS7_GEOMG
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8176..8370
DNA (195bp) protein (65aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8535..8726
DNA (192bp) protein (64aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_62922_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9733..9795
DNA (63bp) protein (21aa)
UbiD family decarboxylase id=2150015 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 10 items

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