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RBG_13_scaffold_22313_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_22313_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..104
DNA (102bp) protein (34aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117..434)
DNA (318bp) protein (106aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2122..2280
DNA (159bp) protein (53aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2873..3073)
DNA (201bp) protein (67aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4225..4818)
DNA (594bp) protein (198aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIZ0_SYNFM
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4939..5640
DNA (702bp) protein (234aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5677..6480)
DNA (804bp) protein (268aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4 6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A id=1841899 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6698..6913
DNA (216bp) protein (72aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..7377)
DNA (288bp) protein (96aa)
aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=GATC_SYNAS
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7659..8558
DNA (900bp) protein (300aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2]
Probable endonuclease 4 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=END4_METMJ
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8551..9297
DNA (747bp) protein (249aa)
hypothetical protein id=14431000 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9306..10376
DNA (1071bp) protein (357aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Prolidase family protein n=2 Tax=Geobacter metallireducens RepID=Q39X00_GEOMG rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10474..11034
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9V5_DESTA
translation elongation factor P
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11221..11631
DNA (411bp) protein (137aa)
Glycine cleavage system H protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5LAV2_9BACI
glycine cleavage system H protein; K02437 glycine cleavage system H protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11834..12520
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDR3_9DELT
ATP-grasp domain-containing protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_22313_curated_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12535..12966
DNA (432bp) protein (144aa)
putative LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
LAO/AO transport system ATPase n=1 Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1MXV3_9FIRM
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 16 items

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