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RBG_13_scaffold_25013_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_25013_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..272)
DNA (270bp) protein (90aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..820)
DNA (552bp) protein (184aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH51_DESAR
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..1448)
DNA (567bp) protein (189aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC (EC:6.3.2.17 6.3.2.12)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein (FolC) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH08_9BACT
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1452..2267)
DNA (816bp) protein (272aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=4112631 bin=GWC2_Deltaproteobacteria_56_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2271..3038)
DNA (768bp) protein (256aa)
Metallo-beta-lactamase superfamily protein id=3893390 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
beta-lactamase domain-containing protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3412..4248)
DNA (837bp) protein (279aa)
cbiO1; cobalt transporter ATP-binding protein CbiO (EC:3.6.3.-)
ATPase component of general energizing module of ECF transporters n=1 Tax=Caloramator australicus RC3 RepID=I7K6W5_9CLOT
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4319..4576)
DNA (258bp) protein (86aa)
Translation elongation factor-like protein id=4167890 bin=GWF2_Syntrophobacterales_56_9 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4698..5522)
DNA (825bp) protein (275aa)
polyamine-transporting ATPase (EC:3.6.3.31); K02006 cobalt/nickel transport system ATP-binding protein
Polyamine-transporting ATPase n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BGR4_THEXL
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5579..6040)
DNA (462bp) protein (154aa)
50S ribosomal protein L17 n=2 Tax=Geobacter metallireducens RepID=RL17_GEOMG
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..7060)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RPOA_ANADF rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7107..7340)
DNA (234bp) protein (78aa)
30S ribosomal protein S4 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RS4_GEOUR
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7783..8154)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Geobacter metallireducens RepID=RS13_GEOMG
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8179..8292)
DNA (114bp) protein (38aa)
ribosomal protein L36, bacterial type
rpmJ; Ribosomal protein L36; K02919 large subunit ribosomal protein L36 id=718871 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8657..9073)
DNA (417bp) protein (139aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase id=4627886 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_25013_curated_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9082..10116)
DNA (1035bp) protein (345aa)
Protein translocase subunit SecY n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 15 items

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