ggKbase home page

RBG_13_scaffold_54724_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_54724_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..722)
DNA (387bp) protein (129aa)
Conserved integral membrane protein n=2 Tax=Clostridium botulinum A RepID=A5I5B1_CLOBH
VanZ family protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1136..1507)
DNA (372bp) protein (124aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1972..2094)
DNA (123bp) protein (41aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2342..3235
DNA (894bp) protein (298aa)
Branched-chain amino acid ABC-type transport system id=4048080 bin=GWA2_Methylomirabilis_73_35 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3240..4172
DNA (933bp) protein (311aa)
Branched-chain amino acid transport system / permease component family protein id=4048079 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
amino acid/amide ABC transporter membrane protein 2, HAAT family
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4163..4903
DNA (741bp) protein (247aa)
ABC transporter family protein id=4851659 bin=GWC2_Methylomirabilis_70_24 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..5604
DNA (705bp) protein (235aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4851660 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5429..5776)
DNA (348bp) protein (116aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..6061
DNA (132bp) protein (44aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6144..6509)
DNA (366bp) protein (122aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6463..6747)
DNA (285bp) protein (95aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7034..7249
DNA (216bp) protein (72aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7725..7910
DNA (186bp) protein (62aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7944..8231
DNA (288bp) protein (96aa)
Putative uncharacterized protein PH0767 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58494_PYRHO
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..8584
DNA (312bp) protein (104aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_17
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8595..8825
DNA (231bp) protein (77aa)
Uncharacterized protein id=1740944 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_54724_curated_18
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..9220
DNA (399bp) protein (133aa)
PilT protein-like id=3268119 bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PilT-like protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 18 items

View Taxonomy