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RBG_13_scaffold_24838_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_24838_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..814)
DNA (813bp) protein (271aa)
Polysulfide reductase, NrfD n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XJR3_DESHA
polysulfide reductase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1203..2270)
DNA (1068bp) protein (356aa)
sigma-54 dependent DNA-binding response regulator id=14626189 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sigma-54-dependent transcriptional response regulator
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2267..3799)
DNA (1533bp) protein (511aa)
Integral membrane sensor signal transduction histidine kinase id=2186601 bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
integral membrane sensor signal transduction histidine kinase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4035..4292
DNA (258bp) protein (86aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4220..4537)
DNA (318bp) protein (106aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4693..4911)
DNA (219bp) protein (73aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4970..5314)
DNA (345bp) protein (115aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..5950)
DNA (477bp) protein (159aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6040..6171)
DNA (132bp) protein (44aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6587..7456
DNA (870bp) protein (290aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP id=4445105 bin=GWF2_Melioribacter_38_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
two component sigma54 specific Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7469..7969
DNA (501bp) protein (167aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH-quinone oxidoreductase, E subunit id=4445107 bin=GWF2_Melioribacter_38_21 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8005..9771
DNA (1767bp) protein (589aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
Putative respiratory-chain NADH dehydrogenase domain (Fragment) id=4445109 bin=GWF2_Melioribacter_38_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9826..10137)
DNA (312bp) protein (104aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_24838_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10702..11655
DNA (954bp) protein (318aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4586669 bin=GWC2_Ignavibacteria_38_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 14 items

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