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RBG_13_scaffold_9956_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_9956_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..120
DNA (120bp) protein (40aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74..607)
DNA (534bp) protein (178aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(677..898)
DNA (222bp) protein (74aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(926..1111)
DNA (186bp) protein (62aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1639..2649
DNA (1011bp) protein (337aa)
ketoisovalerate oxidoreductase subunit VorD (EC:1.2.7.7); K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
Ketoisovalerate oxidoreductase subunit VorD n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCD1_DICT6
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3105..3788)
DNA (684bp) protein (228aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3928..4656
DNA (729bp) protein (243aa)
thiamine pyrophosphate protein domain protein TPP-binding protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTT7_METIM
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..4894)
DNA (192bp) protein (64aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5084..6139
DNA (1056bp) protein (352aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3KZR5_9BACT
4Fe-4S ferredoxin, iron-sulfur binding
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6212..7015)
DNA (804bp) protein (268aa)
GntR family transcriptional regulator n=1 Tax=Desulfurispora thermophila RepID=UPI00037862C5
GntR family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7118..7396)
DNA (279bp) protein (93aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8300..8413
DNA (114bp) protein (38aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8753..9142
DNA (390bp) protein (130aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5W2_METSW
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9155..10402
DNA (1248bp) protein (416aa)
2-ketoisovalerate ferredoxin oxidoreductase subunit alpha n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZL63_THELI
porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10465..11082
DNA (618bp) protein (206aa)
pyruvate synthase (EC:1.2.7.1); K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
Pyruvate synthase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KML8_ARCVS
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11323..11481)
DNA (159bp) protein (53aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_17
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11668..12240
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGT3_9BRAD
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_18
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12546..13004
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3932089 bin=GWC2_Methylomirabilis_70_16 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_19
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13014..14522
DNA (1509bp) protein (503aa)
Tricarboxylate transport membrane protein id=3932087 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_20
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14527..14718)
DNA (192bp) protein (64aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_21
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14825..15493)
DNA (669bp) protein (223aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_22
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15545..15766)
DNA (222bp) protein (74aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_23
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16010..16408
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR9 RepID=C0IN99_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_24
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16482..16757
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00037B41EC
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_9956_curated_25
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16848..17819
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T2U0_BORBO
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 25 items

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