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rifoxyd3_full_scaffold_1595_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyd3_full_scaffold_1595_curated_1
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(3..110)
DNA (108bp) protein (36aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_2
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(117..317)
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=3900647 bin=GWF2_Ignavibacteria_35_20 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_3
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(314..562)
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=1943701 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_4
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(578..778)
DNA (201bp) protein (67aa)
Uncharacterized protein id=4243668 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=CG_Anaero_04
rifoxyd3_full_scaffold_1595_curated_5
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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917..1234
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXT5_ANATU
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_6
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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1231..1536
DNA (306bp) protein (102aa)
Xre family DNA binding protein id=4316583 bin=GWC2_Nitrospirae_57_13 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Xre family DNA-binding protein; K07726 putative transcriptional regulator
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_7
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(1784..1924)
DNA (141bp) protein (47aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(2015..2236)
DNA (222bp) protein (74aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

2790..3047
DNA (258bp) protein (86aa)
folC; folylpolyglutamate synthetase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
Folylpolyglutamate synthetase id=1731870 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_10
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

3150..5627
DNA (2478bp) protein (826aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease id=4459168 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation rbh
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_11
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

5719..6306
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=2165790 bin=GWE2_Gammaproteobacteria_37_16 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_12
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

6310..7005
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=4414142 bin=GWC2_OP3-like_45_7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica) rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

7206..7658
DNA (453bp) protein (151aa)
HEPN domain protein id=1860720 bin=GWD2_Chloroflexi_49_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
HEPN domain-containing protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1595_curated_14
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

7622..7945
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=1860725 bin=GWD2_Chloroflexi_49_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
DNA polymerase, beta-like region
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
Displaying 14 items

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