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rifoxyd3_full_scaffold_2589_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyd3_full_scaffold_2589_curated_1
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(3..137)
DNA (135bp) protein (45aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_2
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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463..732
DNA (270bp) protein (90aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_3
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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723..1211
DNA (489bp) protein (163aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_4
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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1368..1604
DNA (237bp) protein (79aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_5
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(1727..2974)
DNA (1248bp) protein (416aa)
Transposase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QUB0_NOSS7 rbh
transposase rbh
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_6
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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3353..3523
DNA (171bp) protein (57aa)
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=1245103 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_7
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

3618..3968
DNA (351bp) protein (117aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component id=1799882 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_8
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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3958..4251
DNA (294bp) protein (98aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY87_ANATU
hypothetical protein; K08998 hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_2589_curated_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

4267..5343
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=1799879 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_10
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

5351..6151
DNA (801bp) protein (267aa)
Hypothetical membrane protein id=2239044 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good rbh
hypothetical protein; K03217 preprotein translocase subunit YidC
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_11
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

6167..6916
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=2316226 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein; K06346 spoIIIJ-associated protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_12
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

6999..7331
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJB8_9BACT
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

7328..7720
DNA (393bp) protein (131aa)
hypothetical protein id=24532801 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
HEPN domain-containing protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_14
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(7924..8541)
DNA (618bp) protein (206aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_2589_curated_15
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

8671..8817
DNA (147bp) protein (49aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
Displaying 15 items

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