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RBG_13_scaffold_4510_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_4510_curated_1
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists


comp(3..377)
DNA (375bp) protein (125aa)
ctx:Clo1313_3024 DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=725508 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_2
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(447..1640)
DNA (1194bp) protein (398aa)
cae:SMB_G0006 gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] id=725505 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3 rbh
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_3
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(2256..2957)
DNA (702bp) protein (234aa)
DNA polymerase III, delta' subunit (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGF3_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_4
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(3453..3656)
DNA (204bp) protein (68aa)
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_5
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

5130..5843
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=uncultured bacterium RepID=K2D9X7_9BACT rbh
pilT; twitching motility protein PilT; K02669 twitching motility protein PilT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_6
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(5873..6061)
DNA (189bp) protein (63aa)
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_7
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

6156..7046
DNA (891bp) protein (297aa)
Type II secretion system protein n=1 Tax=uncultured bacterium RepID=K2DMJ3_9BACT rbh
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_8
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

7075..7620
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E868_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_9
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

7645..7803
DNA (159bp) protein (53aa)
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_10
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

8535..8678
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003674461
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_11
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(8689..9891)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D4R9_9BACT rbh
two-component sensor histidine kinase
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_12
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(9918..10211)
DNA (294bp) protein (98aa)
hypothetical protein id=22719 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_13
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(10208..11095)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQI0_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_14
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

11167..12045
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BA13_9BACT
hypothetical protein; K01163 hypothetical protein
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_15
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

12104..12517
DNA (414bp) protein (138aa)
transcriptional regulatory protein resD; K07775 two-component system, OmpR family, response regulator ResD id=725497 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
resD; DNA-binding response regulator ResD; K07775 two-component system, OmpR family, response regulator ResD
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_16
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

12581..13141
DNA (561bp) protein (187aa)
seg 73..91 id=725492 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_17
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

13154..13630
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RSU3_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_18
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

13605..14099
DNA (495bp) protein (165aa)
seg 17..32 id=725490 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_19
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(14143..14640)
DNA (498bp) protein (166aa)
transmembrane_regions 15..37 id=725489 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_20
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(14643..15827)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DRW2_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_21
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(15831..16415)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ECT6_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_22
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(16418..16744)
DNA (327bp) protein (109aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=725484 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_23
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(17464..18078)
DNA (615bp) protein (205aa)
transmembrane_regions 12..34 id=725485 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_24
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

18197..18328
DNA (132bp) protein (44aa)
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_25
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(18612..19103)
DNA (492bp) protein (164aa)
transmembrane_regions 20..42 id=725487 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_26
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(19094..19654)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RU44_9BACT
Tax=RBG_13_WWE3_37_7_curated
RBG_13_scaffold_4510_curated_27
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(19654..20082)
DNA (429bp) protein (143aa)
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (Guanine-N(1)-)-methyltransferase n=2 Tax=Bacteria RepID=V5RST3_9BACT
Tax=RBG_13_WWE3_37_7_curated
Displaying 27 items

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