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RBG_13_OP3_44_8_RBG_13_scaffold_6022

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_6022_1
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(26..2275)
DNA (2250bp) protein (750aa)
Spermine synthase; K00797 spermidine synthase [EC:2.5.1.16]
Spermine synthase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSD7_9DELT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
RBG_13_OP3_44_8_RBG_13_scaffold_6022_2
unknown

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comp(2430..3449)
DNA (1020bp) protein (340aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase id=4453237 bin=GWC2_OP3_44_8 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_6022_3
unknown

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comp(3470..4465)
DNA (996bp) protein (332aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
Galactose-1-phosphate uridylyltransferase id=4453236 bin=GWC2_OP3_44_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_6022_4
unknown

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comp(5590..6531)
DNA (942bp) protein (314aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase id=1812710 bin=GWA2_OP3_53_43 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RBG_13_OP3_44_8_RBG_13_scaffold_6022_5
unknown

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comp(6555..8399)
DNA (1845bp) protein (615aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N' id=1812711 bin=GWA2_OP3_53_43 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RBG_13_OP3_44_8_RBG_13_scaffold_6022_6
unknown

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comp(8362..8739)
DNA (378bp) protein (126aa)
Monogalactosyldiacylglycerol synthase id=1812712 bin=GWA2_OP3_53_43 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
1,2-diacylglycerol 3-glucosyltransferase
RBG_13_OP3_44_8_RBG_13_scaffold_6022_7
unknown

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comp(8817..9272)
DNA (456bp) protein (152aa)
Monogalactosyldiacylglycerol synthase id=2881254 bin=GWF2_OP3_43_52 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
RBG_13_OP3_44_8_RBG_13_scaffold_6022_8
unknown

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comp(9277..9822)
DNA (546bp) protein (182aa)
gmhB; protein GmhB (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase id=2881251 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_6022_9
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9819..10643)
DNA (825bp) protein (275aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YC81_THIV6
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFL74599.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
RBG_13_OP3_44_8_RBG_13_scaffold_6022_10
unknown

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comp(10644..13010)
DNA (2367bp) protein (789aa)
nucleoside-diphosphate-sugar epimerase; K12454 CDP-paratose 2-epimerase [EC:5.1.3.10]
NAD-dependent epimerase/dehydratase id=4375070 bin=GWF2_OP3_38_59 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RBG_13_OP3_44_8_RBG_13_scaffold_6022_11
unknown

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comp(13028..13363)
DNA (336bp) protein (112aa)
Glycosyl transferase family 2 id=2881248 bin=GWF2_OP3_43_52 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
family 2 glycosyl transferase
Displaying 11 items

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