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RBG_13_OP3_44_8_RBG_13_scaffold_4931

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_4931_1
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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3..602
DNA (600bp) protein (200aa)
glutamine synthetase, type I; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase, type I n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E1I4_DICTD
Glutamine synthetase, type I {ECO:0000313|EMBL:ACK41509.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
RBG_13_OP3_44_8_RBG_13_scaffold_4931_2
unknown

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718..1440
DNA (723bp) protein (241aa)
Putative uncharacterized protein id=4123514 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GAF sensor protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_3
unknown

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comp(1729..1881)
DNA (153bp) protein (51aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_4
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2185..3423
DNA (1239bp) protein (413aa)
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TTY3_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
RBG_13_OP3_44_8_RBG_13_scaffold_4931_5
unknown

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3512..5458
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036A180F
RBG_13_OP3_44_8_RBG_13_scaffold_4931_6
unknown

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comp(5721..6026)
DNA (306bp) protein (102aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_7
unknown

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6470..6640
DNA (171bp) protein (57aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_8
unknown

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6750..8288
DNA (1539bp) protein (513aa)
hypothetical protein id=24418873 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_9
unknown

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8325..9008
DNA (684bp) protein (228aa)
Putative membrane protein id=4609305 bin=GWF2_OP3_38_59 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_10
unknown

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9012..10406
DNA (1395bp) protein (465aa)
Putative RNA-processing exonuclease id=4011968 bin=GWF2_OP3_43_52 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Putative RNA-processing exonuclease; K07576 metallo-beta-lactamase family protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_11
unknown

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10740..10976
DNA (237bp) protein (79aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_12
unknown

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comp(10973..11173)
DNA (201bp) protein (67aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_13
unknown

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comp(11366..11653)
DNA (288bp) protein (96aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_14
unknown

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comp(12232..13371)
DNA (1140bp) protein (380aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase id=4123590 bin=GWF2_OP3_43_52 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_4931_15
unknown

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comp(13350..14006)
DNA (657bp) protein (219aa)
Predicted dehydrogenase id=4303018 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
mviM; dehydrogenase
RBG_13_OP3_44_8_RBG_13_scaffold_4931_16
unknown

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14489..15766
DNA (1278bp) protein (426aa)
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (EC:3.6.3.44); K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
ABC transporter id=4303019 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_4931_17
unknown

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15850..16761
DNA (912bp) protein (304aa)
30S ribosomal protein S2 id=4123596 bin=GWF2_OP3_43_52 species=Dialister succinatiphilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
RBG_13_OP3_44_8_RBG_13_scaffold_4931_18
unknown

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16761..17294
DNA (534bp) protein (178aa)
Elongation factor Ts id=4986265 bin=GWA2_OP3_53_43 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
translation elongation factor Ts; K02357 elongation factor Ts
RBG_13_OP3_44_8_RBG_13_scaffold_4931_19
unknown

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17291..18013
DNA (723bp) protein (241aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase id=4303023 bin=GWC2_OP3_44_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_4931_20
unknown

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comp(18301..18570)
DNA (270bp) protein (90aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_21
unknown

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19288..19764
DNA (477bp) protein (159aa)
nitrogen regulatory protein PtsN ; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Nitrogen regulatory protein PtsN id=1791208 bin=GWB2_CP_45_9 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_4931_22
unknown

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comp(19915..20169)
DNA (255bp) protein (85aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_23
unknown

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20663..21037
DNA (375bp) protein (125aa)
Putative uncharacterized protein id=4123606 bin=GWF2_OP3_43_52 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_24
unknown

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21042..21311
DNA (270bp) protein (90aa)
HPrNtr domain-containing protein id=4727158 bin=GWC2_OP3-like_45_7 species=Veillonella ratti genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
phosphotransferase system HPr (HPr) family protein
RBG_13_OP3_44_8_RBG_13_scaffold_4931_25
unknown

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comp(22974..23258)
DNA (285bp) protein (95aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_26
unknown

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comp(23298..23525)
DNA (228bp) protein (76aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_4931_27
unknown

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23805..24260
DNA (456bp) protein (152aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Nucleoside-diphosphate-sugar pyrophosphorylase id=4188517 bin=GWF2_OP3_38_59 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RBG_13_OP3_44_8_RBG_13_scaffold_4931_28
unknown

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24454..25623
DNA (1170bp) protein (390aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase id=4621169 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_4931_29
unknown

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25640..26896
DNA (1257bp) protein (419aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase id=4123623 bin=GWF2_OP3_43_52 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_4931_30
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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26981..27397
DNA (417bp) protein (139aa)
Response regulator receiver n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SMV1_PLAL2
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ADG68006.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying items 1-30 of 35 in total

View Taxonomy