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RBG_13_OP3_44_8_RBG_13_scaffold_2273

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_2273_1
unknown

Not on your lists

comp(2..568)
DNA (567bp) protein (189aa)
Ferredoxin id=4113582 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
metal-binding protein
RBG_13_OP3_44_8_RBG_13_scaffold_2273_2
unknown

Not on your lists

comp(572..1900)
DNA (1329bp) protein (443aa)
CO dehydrogenase/acetyl-CoA synthase subunit delta; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-]
CO dehydrogenase/acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) id=4113583 bin=GWF2_OP3_43_52 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_3
unknown

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comp(1924..2346)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=2647828 bin=GWC2_OP3_44_8 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
formylmethanofuran dehydrogenase subunit E-like
RBG_13_OP3_44_8_RBG_13_scaffold_2273_4
unknown

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comp(3019..3336)
DNA (318bp) protein (106aa)
id=4113586 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_5
unknown

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comp(3356..3859)
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=2648053 bin=GWC2_OP3_44_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2273_6
unknown

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comp(3880..4314)
DNA (435bp) protein (145aa)
MgtC/SapB transporter id=2648056 bin=GWC2_OP3_44_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
MgtC/SapB transporter
RBG_13_OP3_44_8_RBG_13_scaffold_2273_7
unknown

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4790..5011
DNA (222bp) protein (74aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2273_8

Not on your lists

comp(5112..5900)
DNA (789bp) protein (263aa)
Marine sediment metagenome DNA, contig: S12H4_S03544 {ECO:0000313|EMBL:GAI93051.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=2648064 bin=GWC2_OP3_44_8 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein; K09798 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2273_9
unknown

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comp(5897..7174)
DNA (1278bp) protein (426aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Periplasmic carboxy-terminal processing protease id=4113591 bin=GWF2_OP3_43_52 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_10
unknown

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comp(7167..8606)
DNA (1440bp) protein (480aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=2648073 bin=GWC2_OP3_44_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_2273_11
unknown

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comp(8607..10049)
DNA (1443bp) protein (481aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A id=4113593 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_12
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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comp(10071..10358)
DNA (288bp) protein (96aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B595D0
RBG_13_OP3_44_8_RBG_13_scaffold_2273_13
unknown

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comp(10477..10701)
DNA (225bp) protein (75aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2273_14
unknown

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12260..13522
DNA (1263bp) protein (421aa)
Putative uncharacterized protein id=4387473 bin=GWC2_OP3_44_8 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2273_15
unknown

Not on your lists

13823..14119
DNA (297bp) protein (99aa)
hypothetical protein id=2255199 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2273_16
unknown

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14167..14397
DNA (231bp) protein (77aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2273_17
unknown

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comp(14399..15295)
DNA (897bp) protein (299aa)
id=4114721 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RBG_13_OP3_44_8_RBG_13_scaffold_2273_18
unknown

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15753..15956
DNA (204bp) protein (68aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2273_19
unknown

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comp(17198..18010)
DNA (813bp) protein (271aa)
Putative uncharacterized protein TTHA0775 id=4537845 bin=GWC2_OP3-like_45_7 species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RBG_13_OP3_44_8_RBG_13_scaffold_2273_20
unknown

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comp(18102..18743)
DNA (642bp) protein (214aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2273_21
unknown

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comp(18813..19205)
DNA (393bp) protein (131aa)
id=4537847 bin=GWC2_OP3-like_45_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RBG_13_OP3_44_8_RBG_13_scaffold_2273_22
unknown

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comp(20417..20755)
DNA (339bp) protein (113aa)
hypothetical protein id=2177319 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2273_23
unknown

Not on your lists

comp(21186..21821)
DNA (636bp) protein (212aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
Glycerol-3-phosphate acyltransferase id=4568928 bin=GWF2_OP3_38_59 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RBG_13_OP3_44_8_RBG_13_scaffold_2273_24
unknown

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comp(21790..22350)
DNA (561bp) protein (187aa)
pgsA_2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4907646 bin=GWC2_OP3_44_8 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_2273_25
unknown

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comp(22347..22946)
DNA (600bp) protein (200aa)
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I id=2177325 bin=GWB2_CP_45_9 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2273_26
unknown

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comp(22943..24739)
DNA (1797bp) protein (599aa)
Elongation factor 4 id=4907648 bin=GWC2_OP3_44_8 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA
RBG_13_OP3_44_8_RBG_13_scaffold_2273_27
unknown

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comp(24756..25337)
DNA (582bp) protein (194aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase id=4113630 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_28
unknown

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comp(26037..27053)
DNA (1017bp) protein (339aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-7-phosphoheptulonate synthase id=4113632 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2273_29
unknown

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comp(27071..28153)
DNA (1083bp) protein (361aa)
Histidinol-phosphate aminotransferase id=4113633 bin=GWF2_OP3_43_52 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
histidinol-phosphate aminotransferase
RBG_13_OP3_44_8_RBG_13_scaffold_2273_30
unknown

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comp(28159..29220)
DNA (1062bp) protein (354aa)
prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
Chorismate mutase id=4113634 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Displaying items 1-30 of 49 in total

View Taxonomy