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RBG_13_OP3_44_8_RBG_13_scaffold_3098

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_3098_1
unknown

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218..631
DNA (414bp) protein (138aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_3098_2

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935..1585
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J927_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38607.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_3098_3
unknown

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1623..1931
DNA (309bp) protein (103aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_3098_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2090..2560
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain K96243) RepID=Q63XH6_BURPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH34553.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain K96243).;"
RBG_13_OP3_44_8_RBG_13_scaffold_3098_5
Pseudoalteromonas sp. BSi20495, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2733..3143
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20495 RepID=G7G522_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:GAA80495.1}; TaxID=386429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas sp. BSi20495.;"
RBG_13_OP3_44_8_RBG_13_scaffold_3098_6

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3298..4200
DNA (903bp) protein (301aa)
Marine sediment metagenome DNA, contig: S01H1_L07525 {ECO:0000313|EMBL:GAF73374.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=1242694 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
topoisomerase IA
RBG_13_OP3_44_8_RBG_13_scaffold_3098_7

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4716..5582
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002E4BB76
Marine sediment metagenome DNA, contig: S01H1_L06713 {ECO:0000313|EMBL:GAF80220.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
abortive phage infection
RBG_13_OP3_44_8_RBG_13_scaffold_3098_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5782..6240
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T22_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87198.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
RBG_13_OP3_44_8_RBG_13_scaffold_3098_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6243..7280
DNA (1038bp) protein (346aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T23_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ87197.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
RBG_13_OP3_44_8_RBG_13_scaffold_3098_10
unknown

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7655..7894
DNA (240bp) protein (80aa)
Uncharacterized protein id=4168216 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
AbrB family transcriptional regulator
RBG_13_OP3_44_8_RBG_13_scaffold_3098_11
unknown

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7894..8292
DNA (399bp) protein (133aa)
PilT protein-like id=3268119 bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PilT protein domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_3098_12
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8305..8943
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Nitrosopumilus RepID=UPI00036F2AB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80043.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
RBG_13_OP3_44_8_RBG_13_scaffold_3098_13

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8953..11196
DNA (2244bp) protein (748aa)
Putative uncharacterized protein n=2 Tax=Methylobacter tundripaludum SV96 RepID=G3J201_9GAMM
Marine sediment metagenome DNA, contig: S06H3_L04981 {ECO:0000313|EMBL:GAI15547.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_3098_14
unknown

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12783..14117
DNA (1335bp) protein (445aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU id=4927191 bin=GWC2_OP3-like_45_7 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RBG_13_OP3_44_8_RBG_13_scaffold_3098_15
unknown

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14105..15055
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase id=2005840 bin=GWB2_CP_45_9 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_3098_16
unknown

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15060..15824
DNA (765bp) protein (255aa)
50S ribosomal protein L25 id=2005837 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
RBG_13_OP3_44_8_RBG_13_scaffold_3098_17
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16077..16649
DNA (573bp) protein (191aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
Peptidyl-tRNA hydrolase n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=PTH_BREBN
Displaying 17 items

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