ggKbase home page

RBG_13_OP3_44_8_RBG_13_scaffold_5826

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_5826_1
unknown

Not on your lists

comp(1220..1933)
DNA (714bp) protein (238aa)
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56]
Ribonuclease PH id=3572156 bin=GWF2_OP3_43_52 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_5826_2
unknown

Not on your lists

comp(1914..2456)
DNA (543bp) protein (181aa)
fumB; protein FumB (EC:4.2.1.2); K01678 fumarate hydratase subunit beta [EC:4.2.1.2]
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit id=3572155 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_5826_3
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2459..3070)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024847AA
Uncharacterized protein {ECO:0000313|EMBL:GAB64366.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_5826_4
unknown

Not on your lists

3642..3938
DNA (297bp) protein (99aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5826_5
unknown

Not on your lists

comp(4334..4603)
DNA (270bp) protein (90aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2]
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit id=2886268 bin=GWC2_OP3_44_8 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_5826_6
unknown

Not on your lists

comp(4967..5362)
DNA (396bp) protein (132aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase id=2050115 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_5826_7
unknown

Not on your lists

comp(5359..5691)
DNA (333bp) protein (111aa)
Organic radical activating enzyme id=2050198 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
radical SAM protein
RBG_13_OP3_44_8_RBG_13_scaffold_5826_8
unknown

Not on your lists

comp(6027..6716)
DNA (690bp) protein (230aa)
7-cyano-7-deazaguanine synthase id=2050200 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
exsB protein; K06920 queuosine biosynthesis protein QueC
RBG_13_OP3_44_8_RBG_13_scaffold_5826_9
unknown

Not on your lists

comp(6706..7062)
DNA (357bp) protein (119aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase id=2886463 bin=GWC2_OP3_44_8 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_5826_10
unknown

Not on your lists

comp(7055..7846)
DNA (792bp) protein (264aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase id=2050204 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_5826_11
unknown

Not on your lists

comp(7843..8595)
DNA (753bp) protein (251aa)
putative N-acetylmuramoyl-L-alanine amidase ; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Protein containing Cell wall hydrolase/autolysin, catalytic domain (Fragment) id=2050207 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_5826_12
unknown

Not on your lists

8995..9120
DNA (126bp) protein (42aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5826_13
unknown

Not on your lists

comp(9926..10846)
DNA (921bp) protein (307aa)
Auxin Efflux Carrier id=2088375 bin=GWB2_CP_45_9 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
auxin efflux carrier family protein; K07088
RBG_13_OP3_44_8_RBG_13_scaffold_5826_14
unknown

Not on your lists

11300..11467
DNA (168bp) protein (56aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5826_15
unknown

Not on your lists

comp(12106..12246)
DNA (141bp) protein (47aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5826_16
unknown

Not on your lists

comp(12272..13360)
DNA (1089bp) protein (363aa)
Uncharacterized protein id=3571928 bin=GWF2_OP3_43_52 species=Mycobacterium phlei genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_5826_17
unknown

Not on your lists

comp(13338..13610)
DNA (273bp) protein (91aa)
peptidase, M48 family (EC:3.4.24.-)
Peptidase M48, Ste24p id=3571956 bin=GWF2_OP3_43_52 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_5826_18
unknown

Not on your lists

comp(13634..14419)
DNA (786bp) protein (262aa)
maf protein id=3571952 bin=GWF2_OP3_43_52 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
maf; maf protein; K06287 septum formation protein
Displaying 18 items

View Taxonomy