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RBG_13_OP3_44_8_RBG_13_scaffold_11564

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_11564_1

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comp(3..377)
DNA (375bp) protein (125aa)
Marine sediment metagenome DNA, contig: S03H2_L01757 {ECO:0000313|EMBL:GAH37365.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_11564_2

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comp(416..1693)
DNA (1278bp) protein (426aa)
Similar to heavy metal efflux pump protein CzcC n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4U7_9BACT
Marine sediment metagenome DNA, contig: S01H1_C00155 {ECO:0000313|EMBL:GAF72797.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
outer membrane efflux protein
RBG_13_OP3_44_8_RBG_13_scaffold_11564_3
unknown

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comp(1730..2014)
DNA (285bp) protein (95aa)
DUF156 id=1709333 bin=GWB2_CP_45_9 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11564_4
unknown

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comp(2017..2718)
DNA (702bp) protein (234aa)
Uncharacterized protein id=2185105 bin=GWE2_Gammaproteobacteria_42_36 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11564_5
unknown

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comp(2708..3247)
DNA (540bp) protein (180aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II id=2185107 bin=GWE2_Gammaproteobacteria_42_36 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
RBG_13_OP3_44_8_RBG_13_scaffold_11564_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3311..4312)
DNA (1002bp) protein (334aa)
Thiamin biosynthesis protein n=1 Tax=planctomycete KSU-1 RepID=I3ILD8_9PLAN
Thiamin biosynthesis protein {ECO:0000313|EMBL:GAB62533.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11564_7

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comp(4389..5195)
DNA (807bp) protein (269aa)
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium sp. MB1 RepID=U6EDR3_9EURY
Marine sediment metagenome DNA, contig: S01H1_S18308 {ECO:0000313|EMBL:GAG21841.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribulose-1,5-biphosphate synthetase; K03146 thiamine biosynthetic enzyme
RBG_13_OP3_44_8_RBG_13_scaffold_11564_8

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comp(5536..5841)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYV3_METTM
Marine sediment metagenome DNA, contig: S01H4_S01833 {ECO:0000313|EMBL:GAG88209.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11564_9

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comp(5854..6390)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1WWG9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD22000.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hemerythrin HHE cation binding domain-containing protein
Displaying 9 items

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