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RBG_13_OP3_44_8_RBG_13_scaffold_2961

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_2961_1
unknown

Not on your lists

comp(3..212)
DNA (210bp) protein (70aa)
hypothetical protein GobsU_08799 id=2310247 bin=GWB2_CP_45_9 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2961_2
unknown

Not on your lists

comp(569..1723)
DNA (1155bp) protein (385aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase id=2310246 bin=GWB2_CP_45_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2961_3
unknown

Not on your lists

comp(1726..2421)
DNA (696bp) protein (232aa)
hypothetical protein id=4308511 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RBG_13_OP3_44_8_RBG_13_scaffold_2961_4
unknown

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comp(2397..2714)
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=3174548 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
HhH-GPD family protein; K07457 endonuclease III related protein
RBG_13_OP3_44_8_RBG_13_scaffold_2961_5
unknown

Not on your lists

comp(3046..4998)
DNA (1953bp) protein (651aa)
Uncharacterized protein id=3984684 bin=GWF2_OP3_43_52 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2961_6
unknown

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comp(5000..7381)
DNA (2382bp) protein (794aa)
Transglutaminase domain-containing protein id=3984691 bin=GWF2_OP3_43_52 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
transglutaminase domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_2961_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7359..8450)
DNA (1092bp) protein (364aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K2R4_CLOPA
hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AGK96883.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2961_8
unknown

Not on your lists

comp(8437..8646)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI00037BB722
hypC; hydrogenase assembly chaperone HypC
RBG_13_OP3_44_8_RBG_13_scaffold_2961_9

Not on your lists

comp(8659..9774)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000375CB38
Marine sediment metagenome DNA, contig: S01H4_C00824 {ECO:0000313|EMBL:GAG57094.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF
RBG_13_OP3_44_8_RBG_13_scaffold_2961_10
unknown

Not on your lists

comp(9764..10594)
DNA (831bp) protein (277aa)
aminodeoxychorismate lyase (EC:4.1.3.38); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched chain amino acid aminotransferase id=3984693 bin=GWF2_OP3_43_52 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2961_11
unknown

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comp(10582..11955)
DNA (1374bp) protein (458aa)
para-aminobenzoate synthase subunit I (EC:4.1.3.27); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] id=14428998 bin=bin3_NC10 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
para-aminobenzoate synthase subunit I (EC:4.1.3.27); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
RBG_13_OP3_44_8_RBG_13_scaffold_2961_12
unknown

Not on your lists

comp(11927..12748)
DNA (822bp) protein (274aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit id=4202396 bin=GWF2_OP3_43_52 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2961_13
unknown

Not on your lists

comp(12741..13637)
DNA (897bp) protein (299aa)
Putative uncharacterized protein id=4202398 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein; K01163 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2961_14
unknown

Not on your lists

comp(13641..14132)
DNA (492bp) protein (164aa)
Putative uncharacterized protein PH1693 id=4243325 bin=GWC2_OP3-like_45_7 species=Pyrococcus horikoshii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein; K01163 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2961_15
unknown

Not on your lists


comp(14129..14449)
DNA (321bp) protein (107aa)
Glucose-6-phosphate isomerase id=4202400 bin=GWF2_OP3_43_52 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
methionyl-tRNA synthetase
RBG_13_OP3_44_8_RBG_13_scaffold_2961_16
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14465..15880)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQB5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63910.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2961_17
unknown

Not on your lists

15941..17278
DNA (1338bp) protein (446aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2961_18
unknown

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comp(19611..20252)
DNA (642bp) protein (214aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2961_19
unknown

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comp(20447..20845)
DNA (399bp) protein (133aa)
YHS domain protein id=4281985 bin=GWF2_OP3_43_52 species=Sulfolobus solfataricus genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Displaying 19 items

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