ggKbase home page

RBG_13_OP3_44_8_RBG_13_scaffold_2817

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_2817_1
unknown

Not on your lists

101..1072
DNA (972bp) protein (324aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=2788054 bin=GWF2_Melioribacter_38_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
oxidoreductase FAD/NAD(P)-binding subunit
RBG_13_OP3_44_8_RBG_13_scaffold_2817_2
unknown

Not on your lists

1075..2433
DNA (1359bp) protein (453aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdopterin biosynthesis protein MoeA id=3597587 bin=GWF2_OP3_43_52 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2817_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2494..3681
DNA (1188bp) protein (396aa)
Phosphate-selective porin O and P id=24459846 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Alistipes sp. CAG:268 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69018.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_4
unknown

Not on your lists

4670..4972
DNA (303bp) protein (101aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2817_5
unknown

Not on your lists

4977..8231
DNA (3255bp) protein (1085aa)
Molybdopterin oxidoreductase id=3597607 bin=GWF2_OP3_43_52 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
molybdopterin oxidoreductase; K08357 tetrathionate reductase subunit A
RBG_13_OP3_44_8_RBG_13_scaffold_2817_6
unknown

Not on your lists

8242..8631
DNA (390bp) protein (130aa)
Response regulator receiver protein id=4233008 bin=GWC2_Elusimicrobia_64_44 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Response regulator
RBG_13_OP3_44_8_RBG_13_scaffold_2817_7
unknown

Not on your lists

8731..8907
DNA (177bp) protein (59aa)
Sec-independent protein translocase protein TatA id=3597636 bin=GWF2_OP3_43_52 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Sec-independent protein translocase TatA
RBG_13_OP3_44_8_RBG_13_scaffold_2817_8
unknown

Not on your lists

8956..9675
DNA (720bp) protein (240aa)
Sec-independent protein translocase, TatC subunit id=1984788 bin=GWB2_CP_45_9 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Sec-independent protein translocase subunit TatC; K03118 sec-independent protein translocase protein TatC
RBG_13_OP3_44_8_RBG_13_scaffold_2817_9
unknown

Not on your lists

9672..10259
DNA (588bp) protein (196aa)
Probable molybdenum cofactor guanylyltransferase id=1984787 bin=GWB2_CP_45_9 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
molybdenum cofactor guanylyltransferase
RBG_13_OP3_44_8_RBG_13_scaffold_2817_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10240..11214
DNA (975bp) protein (325aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Thermincola potens (strain JR) RepID=D5XCK0_THEPJ
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
RBG_13_OP3_44_8_RBG_13_scaffold_2817_11
unknown

Not on your lists

11220..11741
DNA (522bp) protein (174aa)
Chromate transport protein ChrA id=4541529 bin=GWC2_OP3_44_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
chromate transporter
RBG_13_OP3_44_8_RBG_13_scaffold_2817_12
Pseudomonas sp. GM84, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..12193
DNA (456bp) protein (152aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Pseudomonas sp. GM84 IPR9_9PSED">RepID=J3IPR9_9PSED
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
moaC; molybdenum cofactor biosynthesis protein MoaC
RBG_13_OP3_44_8_RBG_13_scaffold_2817_13
unknown

Not on your lists

12162..12635
DNA (474bp) protein (158aa)
MOSC domain protein id=4541525 bin=GWC2_OP3_44_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
MOSC domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_2817_14
unknown

Not on your lists

12628..13104
DNA (477bp) protein (159aa)
Molybdenum cofactor synthesis domain protein id=4541527 bin=GWC2_OP3_44_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
molybdenum cofactor synthesis protein
RBG_13_OP3_44_8_RBG_13_scaffold_2817_15
unknown

Not on your lists

13211..13597
DNA (387bp) protein (129aa)
Nitroreductase id=4011972 bin=GWF2_OP3_43_52 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
nitroreductase
RBG_13_OP3_44_8_RBG_13_scaffold_2817_16
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

13878..15638
DNA (1761bp) protein (587aa)
histone-lysine N-methyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B32AAA
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:AEH43949.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_17

Not on your lists

15710..15958
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJL5_9CLOT
Marine sediment metagenome DNA, contig: S01H4_C00423 {ECO:0000313|EMBL:GAG72163.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2817_18
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16195..16863
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003677A1C
Enhancing lycopene biosynthesis protein 2 {ECO:0000313|EMBL:EFK06850.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
isoprenoid biosynthesis protein with amidotransferase-like domain
RBG_13_OP3_44_8_RBG_13_scaffold_2817_19
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16864..18018
DNA (1155bp) protein (385aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRG8_ALKMQ
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABR48786.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_20
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18002..18820
DNA (819bp) protein (273aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:ADL07961.1}; EC=1.2.7.3 {ECO:0000313|EMBL:ADL07961.1};; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
2-oxoglutarate ferredoxin oxidoreductase, beta subunit n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3I4_THEOJ
RBG_13_OP3_44_8_RBG_13_scaffold_2817_21

Not on your lists

18783..19415
DNA (633bp) protein (211aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003739E26
Marine sediment metagenome DNA, contig: S06H3_C02695 {ECO:0000313|EMBL:GAH95066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_22
unknown

Not on your lists

19412..20548
DNA (1137bp) protein (379aa)
atm:ANT_20580 sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] id=1246669 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
RBG_13_OP3_44_8_RBG_13_scaffold_2817_23

Not on your lists

20583..21482
DNA (900bp) protein (300aa)
succinyl-CoA synthetase, subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA synthetase alpha subunit n=1 Tax=uncultured prokaryote RepID=H5S9J6_9ZZZZ
Succinyl-CoA synthetase alpha subunit {ECO:0000313|EMBL:BAL52832.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_24
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

21713..22870
DNA (1158bp) protein (386aa)
aksA; trans-homoaconitate synthase (EC:2.3.3.14); K02594 homocitrate synthase NifV [EC:2.3.3.14]
Homocitrate synthase {ECO:0000313|EMBL:ACI18795.1}; EC=2.3.3.14 {ECO:0000313|EMBL:ACI18795.1};; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
Homocitrate synthase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2Q8_DICTD
RBG_13_OP3_44_8_RBG_13_scaffold_2817_25

Not on your lists

23107..23508
DNA (402bp) protein (134aa)
heterodisulfide reductase subunit C-like protein; K03390 heterodisulfide reductase subunit C [EC:1.8.98.1] id=17343473 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Marine sediment metagenome DNA, contig: S01H1_C00127 {ECO:0000313|EMBL:GAF72298.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
heterodisulfide reductase subunit C-like protein
RBG_13_OP3_44_8_RBG_13_scaffold_2817_26
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23508..24404
DNA (897bp) protein (299aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1]
CoB--CoM heterodisulfide reductase {ECO:0000313|EMBL:AEG15083.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AEG15083.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
CoB--CoM heterodisulfide reductase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIW0_DESK7
RBG_13_OP3_44_8_RBG_13_scaffold_2817_27
unknown

Not on your lists

24410..25420
DNA (1011bp) protein (337aa)
Acetylserotonin O-methyltransferase id=4425914 bin=GWF2_Bacteroidetes_35_48 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Acetylserotonin O-methyltransferase
RBG_13_OP3_44_8_RBG_13_scaffold_2817_28
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

25658..26458
DNA (801bp) protein (267aa)
4Fe-4S ferredoxin; K03388 heterodisulfide reductase subunit A [EC:1.8.98.1]
disulfide reductase n=2 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A19EF4
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACD90267.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
RBG_13_OP3_44_8_RBG_13_scaffold_2817_29
unknown

Not on your lists

26979..27215
DNA (237bp) protein (79aa)
heterodisulfide reductase, partial n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B35359
4Fe-4S ferredoxin
RBG_13_OP3_44_8_RBG_13_scaffold_2817_30
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27239..27757
DNA (519bp) protein (173aa)
heterodisulfide reductase subunit C; K03390 heterodisulfide reductase subunit C [EC:1.8.98.1]
Heterodisulfide reductase, C subunit n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DMG5_9FIRM
Heterodisulfide reductase, C subunit {ECO:0000313|EMBL:CCO07469.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
Displaying items 1-30 of 32 in total

View Taxonomy