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RBG_13_OP3_44_8_RBG_13_scaffold_5908

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_5908_1
unknown

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185..1906
DNA (1722bp) protein (574aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase id=4202699 bin=GWF2_OP3_43_52 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_5908_2
unknown

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1929..2444
DNA (516bp) protein (172aa)
Translation initiation factor IF-3 id=2845497 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
translation initiation factor IF-3; K02520 translation initiation factor IF-3
RBG_13_OP3_44_8_RBG_13_scaffold_5908_3
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2464..2664
DNA (201bp) protein (67aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 id=4202701 bin=GWF2_OP3_43_52 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
RBG_13_OP3_44_8_RBG_13_scaffold_5908_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2703..3059
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBQ8_AMMDK
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
RBG_13_OP3_44_8_RBG_13_scaffold_5908_5
unknown

Not on your lists

3071..3730
DNA (660bp) protein (220aa)
TrkA-N domain protein id=4202703 bin=GWF2_OP3_43_52 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
TrkA domain-containing protein; K03499 trk system potassium uptake protein TrkA
RBG_13_OP3_44_8_RBG_13_scaffold_5908_6
unknown

Not on your lists

3769..4431
DNA (663bp) protein (221aa)
TrkA-N domain protein id=4202704 bin=GWF2_OP3_43_52 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
K+ transport system, NAD-binding component; K03499 trk system potassium uptake protein TrkA
RBG_13_OP3_44_8_RBG_13_scaffold_5908_7
unknown

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4428..4544
DNA (117bp) protein (39aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5908_8
unknown

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4541..6043
DNA (1503bp) protein (501aa)
Cation transporter id=2845453 bin=GWC2_OP3_44_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
cation transporter; K03498 trk system potassium uptake protein TrkH
RBG_13_OP3_44_8_RBG_13_scaffold_5908_9
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6040..6528
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q8T6_CALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ08060.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
RBG_13_OP3_44_8_RBG_13_scaffold_5908_10
unknown

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6498..7511
DNA (1014bp) protein (338aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit id=4568614 bin=GWC2_OP3-like_45_7 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RBG_13_OP3_44_8_RBG_13_scaffold_5908_11
unknown

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comp(7566..7922)
DNA (357bp) protein (119aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_5908_12
unknown

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comp(7938..8429)
DNA (492bp) protein (164aa)

This feature has no annotations

Displaying 12 items

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