ggKbase home page

GWC2_DPX2_66_88_gwc2_scaffold_5839

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX2_66_88_gwc2_scaffold_5839_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168..1103
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4745659 bin=GWC2_Deltaproteobacteria_66_88 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_5839_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1117..1821
DNA (705bp) protein (235aa)
50S ribosomal protein L25 id=2246747 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=GWA2_Deltaproteobacteria_65_63_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
GWC2_DPX2_66_88_gwc2_scaffold_5839_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2017..2523
DNA (507bp) protein (169aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWA2_Deltaproteobacteria_65_63_curated
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=2246748 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWC2_DPX2_66_88_gwc2_scaffold_5839_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2504..2923
DNA (420bp) protein (140aa)
30S ribosomal protein S6 id=3138660 bin=GWA2_Deltaproteo_65_63 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
SSU ribosomal protein S6P Tax=GWA2_Deltaproteobacteria_65_63_curated
SSU ribosomal protein S6P
GWC2_DPX2_66_88_gwc2_scaffold_5839_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2947..3351
DNA (405bp) protein (135aa)
Single-stranded DNA-binding protein id=2246750 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=GWA2_Deltaproteobacteria_65_63_curated
single-strand binding protein
GWC2_DPX2_66_88_gwc2_scaffold_5839_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3390..3692
DNA (303bp) protein (101aa)
30S ribosomal protein S18 id=3138662 bin=GWA2_Deltaproteo_65_63 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=GWA2_Deltaproteobacteria_65_63_curated
rpsR; 30S ribosomal protein S18
GWC2_DPX2_66_88_gwc2_scaffold_5839_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3704..4150
DNA (447bp) protein (149aa)
50S ribosomal protein L9 id=3138663 bin=GWA2_Deltaproteo_65_63 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=GWA2_Deltaproteobacteria_65_63_curated
50S ribosomal protein L9
GWC2_DPX2_66_88_gwc2_scaffold_5839_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4200..6848
DNA (2649bp) protein (883aa)
Replicative DNA helicase id=4745666 bin=GWC2_Deltaproteobacteria_66_88 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
DNA helicase Tax=GWA2_Deltaproteobacteria_65_63_curated
DNA helicase
GWC2_DPX2_66_88_gwc2_scaffold_5839_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7048..7629
DNA (582bp) protein (194aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
Carbonic anhydrase id=4745667 bin=GWC2_Deltaproteobacteria_66_88 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
carbonic anhydrase
GWC2_DPX2_66_88_gwc2_scaffold_5839_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7639..8526)
DNA (888bp) protein (296aa)
Serine protease (EC:3.4.21.-); K07001 NTE family protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Serine protease (EC:3.4.21.-)
Patatin id=4745668 bin=GWC2_Deltaproteobacteria_66_88 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_5839_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8540..9331)
DNA (792bp) protein (264aa)
multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWA2_D
Phosphomethylpyrimidine kinase id=4745669 bin=GWC2_Deltaproteobacteria_66_88 species=Rhizobium freirei genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
phosphomethylpyrimidine kinase
GWC2_DPX2_66_88_gwc2_scaffold_5839_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9337..10779)
DNA (1443bp) protein (481aa)
Nitrogen fixation master sigma-54-dependent transcriptional response regulator id=2246783 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWA2_Deltaproteobacteria
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator
GWC2_DPX2_66_88_gwc2_scaffold_5839_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10776..11897)
DNA (1122bp) protein (374aa)
two component sensor histidine kinase; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] Tax=GWA2_Deltaproteobacteria_65_63_curated
Nitrogen fixation master sensor histidine kinase, PAS domain-containing id=3138781 bin=GWA2_Deltaproteo_65_63 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
gnfL; nitrogen fixation master sensor histidine kinase, PAS domain-containing
GWC2_DPX2_66_88_gwc2_scaffold_5839_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11894..12853)
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase id=2246785 bin=GWB2_Deltaproteobacteria_65_81 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tRNA-dihydrouridine synthase Tax=GWA2_Deltaproteobacteria_65_63_curated
tRNA-dihydrouridine synthase
Displaying 14 items

View Taxonomy