ggKbase home page

GWC2_DPX2_66_88_gwc2_scaffold_1696

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX2_66_88_gwc2_scaffold_1696_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..547
DNA (546bp) protein (182aa)
NAD-dependent epimerase/dehydratase id=1809927 bin=GWB2_Deltaproteobacteria_65_81 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..1699
DNA (1014bp) protein (338aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit id=3585614 bin=GWC2_Deltaproteobacteria_66_88 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_1696_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1707..2678
DNA (972bp) protein (324aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
Transketolase central region id=1809997 bin=GWB2_Deltaproteobacteria_65_81 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
transketolase
GWC2_DPX2_66_88_gwc2_scaffold_1696_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2765..3961
DNA (1197bp) protein (399aa)
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12) Tax=
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12)
dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex id=3478288 bin=GWA2_Deltaproteo_65_63 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_1696_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3946..4881)
DNA (936bp) protein (312aa)
thioredoxin-disulfide reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWA2_Deltaproteobacteria_65_63_curated
Thioredoxin reductase id=1810002 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
thioredoxin-disulfide reductase
GWC2_DPX2_66_88_gwc2_scaffold_1696_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5052..6272
DNA (1221bp) protein (407aa)
RNA methyltransferase; K00599 [EC:2.1.1.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
23S rRNA m(5)U-1939 methyltransferase id=1810004 bin=GWB2_Deltaproteobacteria_65_81 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RNA methyltransferase
GWC2_DPX2_66_88_gwc2_scaffold_1696_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6285..7298)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase GroES domain-containing protein; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
Alcohol dehydrogenase GroES domain protein id=3585807 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Hydrogenobaculum taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Alcohol dehydrogenase GroES domain-containing protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7558..9360
DNA (1803bp) protein (601aa)
PAS domain S-box Tax=GWA2_Deltaproteobacteria_65_63_curated
PAS domain S-box id=1810007 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
PAS domain S-box
GWC2_DPX2_66_88_gwc2_scaffold_1696_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9365..9514)
DNA (150bp) protein (50aa)
Cytochrome oxidase maturation protein, cbb3-type id=3585814 bin=GWC2_Deltaproteobacteria_66_88 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
cytochrome oxidase maturation protein, cbb3-type Tax=GWA2_Deltaproteobacteria_65_63_curated
cytochrome oxidase maturation protein, cbb3-type
GWC2_DPX2_66_88_gwc2_scaffold_1696_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9517..11922)
DNA (2406bp) protein (802aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWA2_Deltaproteobacteria_65_63_curated
Heavy metal translocating P-type ATPase id=1810009 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
heavy metal translocating P-type ATPase
GWC2_DPX2_66_88_gwc2_scaffold_1696_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11937..12632)
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=1810010 bin=GWB2_Deltaproteobacteria_65_81 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein; K09792 hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12616..13380)
DNA (765bp) protein (255aa)
FixH family protein id=3478314 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13377..14480)
DNA (1104bp) protein (368aa)
Polyferredoxin-like protein id=1810012 bin=GWB2_Deltaproteobacteria_65_81 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
polyferredoxin-like protein Tax=GWA2_Deltaproteobacteria_65_63_curated
polyferredoxin-like protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14520..15002)
DNA (483bp) protein (161aa)
Cytochrome c class I id=1810013 bin=GWB2_Deltaproteobacteria_65_81 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III Tax=GWA2_Deltaproteobacteria_65_63_curated
cytochrome c class I
GWC2_DPX2_66_88_gwc2_scaffold_1696_15
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15007..15186)
DNA (180bp) protein (60aa)
Putative uncharacterized protein id=1810014 bin=GWB2_Deltaproteobacteria_65_81 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15183..16169)
DNA (987bp) protein (329aa)
Cytochrome c oxidase, cbb3-type, subunit II id=1810015 bin=GWB2_Deltaproteobacteria_65_81 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=GWA2_Deltaproteobacteria_65_63_curated
cbb3-type cytochrome c oxidase subunit II
GWC2_DPX2_66_88_gwc2_scaffold_1696_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16173..17558)
DNA (1386bp) protein (462aa)
cytochrome-cbb3 oxidase, subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
Cytochrome-cbb3 oxidase, subunit I id=1810016 bin=GWB2_Deltaproteobacteria_65_81 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cytochrome-cbb3 oxidase, subunit I
GWC2_DPX2_66_88_gwc2_scaffold_1696_18
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17749..20499
DNA (2751bp) protein (917aa)
two-component hybrid sensor and regulator id=1810017 bin=GWB2_Deltaproteobacteria_65_81 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
PAS/PAS domain-containing sensor histidine kinase response regulator Tax=GWA2_Deltaproteobacteria_65_63_curated
PAS/PAS domain-containing sensor histidine kinase response regulator
GWC2_DPX2_66_88_gwc2_scaffold_1696_19
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20522..21202)
DNA (681bp) protein (227aa)
Putative uncharacterized protein id=3478321 bin=GWA2_Deltaproteo_65_63 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_1696_20
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21199..21951)
DNA (753bp) protein (251aa)
CO dehydrogenase accessory protein CooC id=3478322 bin=GWA2_Deltaproteo_65_63 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
acsF; protein AcsF; K07321 CO dehydrogenase maturation factor Tax=GWA2_Deltaproteobacteria_65_63_curated
CO dehydrogenase accessory protein CooC
GWC2_DPX2_66_88_gwc2_scaffold_1696_21
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21948..22988)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein id=3585853 bin=GWC2_Deltaproteobacteria_66_88 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
metH; methionine synthase
GWC2_DPX2_66_88_gwc2_scaffold_1696_22
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22985..24679)
DNA (1695bp) protein (565aa)
Ferredoxin id=1810021 bin=GWB2_Deltaproteobacteria_65_81 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
ferredoxin Tax=GWA2_Deltaproteobacteria_65_63_curated
ferredoxin
GWC2_DPX2_66_88_gwc2_scaffold_1696_23
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24691..26040)
DNA (1350bp) protein (450aa)
acetyl-CoA decarbonylase/synthase complex subunit gamma; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
Carbon monoxide dehydrogenase corrinoid/iron-sulfur protein, gamma subunit id=3478325 bin=GWA2_Deltaproteo_65_63 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
acetyl-CoA decarbonylase/synthase complex subunit gamma
GWC2_DPX2_66_88_gwc2_scaffold_1696_24
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26031..26951)
DNA (921bp) protein (307aa)
acsD; acetyl-CoA decarbonylase/synthase complex subunit delta; K00194 acetyl-CoA decarbonylase/synthase complex subunit delta Tax=GWA2_Deltaproteobacteria_65_63_curated
CO dehydrogenase/acetyl-CoA synthase, iron-sulfur protein id=1810023 bin=GWB2_Deltaproteobacteria_65_81 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
acsD; acetyl-CoA decarbonylase/synthase complex subunit delta
GWC2_DPX2_66_88_gwc2_scaffold_1696_25
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26948..27325)
DNA (378bp) protein (126aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169); K14138 carbon monoxide dehydrogenase / acetyl-CoA synthase subunit alpha [EC:1.2.7.4 1.2.99.2 2.3.1.169] Tax=G
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit id=3478490 bin=GWA2_Deltaproteo_65_63 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Displaying 25 items

View Taxonomy