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GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(50..502)
DNA (453bp) protein (151aa)
Putative GatB/Yqey id=4613243 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
GatB/Yqey Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GatB/Yqey
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_2
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(515..1552)
DNA (1038bp) protein (346aa)
Endonuclease/exonuclease/phosphatase family id=4902349 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
endonuclease/exonuclease/phosphatase family Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
endonuclease/exonuclease/phosphatase family
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3691..4455
DNA (765bp) protein (255aa)
DNA polymerase I Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
DNA polymerase I id=4613245 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
polA; DNA polymerase I
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4492..5016)
DNA (525bp) protein (175aa)
Transposase id=4613300 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
transposase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
transposase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5072..6103)
DNA (1032bp) protein (344aa)
Hexose-6-phosphate isomerase id=4902352 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Hexose-6-phosphate isomerase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Hexose-6-phosphate isomerase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6112..7863)
DNA (1752bp) protein (584aa)
Phosphoenolpyruvate-protein phosphotransferase id=4902353 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
phosphoenolpyruvate--protein phosphotransferase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
phosphoenolpyruvate--protein phosphotransferase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_7
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7865..8131)
DNA (267bp) protein (89aa)
Phosphotransferase system, phosphocarrier protein HPr id=4902354 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
phosphotransferase system, phosphocarrier protein HPr Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
phosphotransferase system, phosphocarrier protein HPr
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8128..9120)
DNA (993bp) protein (331aa)
geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Geranylgeranyl pyrophosphate synthase id=4902355 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
geranylgeranyl pyrophosphate synthase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9117..10154)
DNA (1038bp) protein (346aa)
FMN-dependent L-lactate dehydrogenase-like protein; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Isopentenyl-diphosphate delta-isomerase id=4613305 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
FMN-dependent L-lactate dehydrogenase-like protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_10
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11058..12371
DNA (1314bp) protein (438aa)
Major facilitator superfamily MFS_1 id=4613311 bin=GWF2_Melioribacter_38_21 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
major facilitator superfamily mfs_1 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
major facilitator transporter
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_11
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12413..12766
DNA (354bp) protein (118aa)
S23 ribosomal protein id=4902360 bin=GWC2_Ignavibacteria_38_9 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
S23 ribosomal protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S23 ribosomal protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_8555_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12811..13341)
DNA (531bp) protein (177aa)
putative RNA methylase family protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
rRNA (Guanine-N(2)-)-methyltransferase id=4902361 bin=GWC2_Ignavibacteria_38_9 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Displaying 12 items

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