ggKbase home page

GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..419)
DNA (417bp) protein (139aa)
NolG efflux transporter id=4406525 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
NolG efflux transporter
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_2
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(437..1495)
DNA (1059bp) protein (353aa)
Efflux transporter, RND family, MFP subunit id=4406527 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
RND family efflux transporter MFP subunit Tax=GWB2_Ignavibacteria_35_6b_curated
RND family efflux transporter MFP subunit
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1521..2840)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein id=4406529 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
outer membrane efflux protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
outer membrane efflux protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2837..3472)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family id=4406531 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
transcriptional regulator, TetR family Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
transcriptional regulator, TetR family
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3749..4225)
DNA (477bp) protein (159aa)
id=4406533 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
id=4406533 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4524..4739
DNA (216bp) protein (72aa)
Putative uncharacterized protein id=4406534 bin=GWC2_Ignavibacteria_38_9 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
addiction module proein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
addiction module proein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_7
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4842..5936)
DNA (1095bp) protein (365aa)
Carbohydrate-selective porin id=4406536 bin=GWC2_Ignavibacteria_38_9 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
carbohydrate-selective porin Oprb; K07267 porin Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
carbohydrate-selective porin OprB
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5933..6196)
DNA (264bp) protein (88aa)
id=4406538 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
id=4406538 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6377..8440)
DNA (2064bp) protein (688aa)
processing peptidase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Processing peptidase id=4406539 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
processing peptidase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_10
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8562..9887)
DNA (1326bp) protein (442aa)
Processing peptidase id=2786958 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
processing peptidase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
processing peptidase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_11
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10114..11658
DNA (1545bp) protein (515aa)
hypothetical protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Gll0821 protein id=4406543 bin=GWC2_Ignavibacteria_38_9 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11875..12846
DNA (972bp) protein (324aa)
id=4406545 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
id=4406545 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_13
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12970..13818
DNA (849bp) protein (283aa)
id=4406546 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
id=4406546 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_14
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14033..15022)
DNA (990bp) protein (330aa)
Putative transmembrane protein id=4406547 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
transmembrane protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
transmembrane protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_15
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15048..15713)
DNA (666bp) protein (222aa)
id=4406549 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
id=4406549 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_16
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15703..16278)
DNA (576bp) protein (192aa)
Sigma-70 family RNA polymerase sigma factor id=4406550 bin=GWC2_Ignavibacteria_38_9 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_17
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16426..16725
DNA (300bp) protein (100aa)
Putative uncharacterized protein id=4406611 bin=GWC2_Ignavibacteria_38_9 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
hypothetical protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_18
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16792..17316)
DNA (525bp) protein (175aa)
Putative aminopeptidase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Putative aminopeptidase id=2786792 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
fibronectin type III domain-containing protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_19
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19922..20593)
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=4406615 bin=GWC2_Ignavibacteria_38_9 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
hypothetical protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_20
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21250..21561)
DNA (312bp) protein (104aa)
nucleotidyltransferase (EC:2.7.7.-); K00992 [EC:2.7.7.-] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
nucleotidyltransferase (EC:2.7.7.-)
Putative uncharacterized protein id=2786777 bin=GWF2_Melioribacter_38_21 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_21
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21540..21929)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=4406619 bin=GWC2_Ignavibacteria_38_9 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
HEPN domain-containing protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
HEPN domain-containing protein
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_22
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22187..22813)
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family id=4406621 bin=GWC2_Ignavibacteria_38_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
LuxR family transcriptional regulator Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
LuxR family transcriptional regulator
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_23
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22878..25946)
DNA (3069bp) protein (1023aa)
Histidine kinase id=4406623 bin=GWC2_Ignavibacteria_38_9 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
histidine kinase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
histidine kinase
GWC2_Ignavibacteria_38_9_gwc2_scaffold_3650_24
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(26128..27246)
DNA (1119bp) protein (373aa)
Glycyl-tRNA synthetase id=4666765 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
glycyl-tRNA synthetase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
glycyl-tRNA synthetase
Displaying 24 items

View Taxonomy