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GWD2_RBX1_39_127_gwd2_scaffold_610

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_610_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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161..691
DNA (531bp) protein (177aa)
id=1993273 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1993273 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_610_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(755..2140)
DNA (1386bp) protein (462aa)
UvrD/REP helicase id=2063613 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
UvrD/REP helicase Tax=GWF2_RBX1_38_17_curated
UvrD/REP helicase
GWD2_RBX1_39_127_gwd2_scaffold_610_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2361..3137
DNA (777bp) protein (259aa)
id=2063615 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4216701 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_610_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3556..4290
DNA (735bp) protein (245aa)
Family 3 extracellular solute-binding protein id=1993269 bin=GWE2_RBX1_39_32 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 3 extracellular solute-binding protein Tax=GWF2_RBX1_38_17_curated
family 3 extracellular solute-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_610_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4403..4813
DNA (411bp) protein (137aa)
id=1993268 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1993268 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_610_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4921..5418)
DNA (498bp) protein (166aa)
id=1993267 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1993267 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_610_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(5622..5909)
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=1993266 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_610_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6233..7369
DNA (1137bp) protein (379aa)
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) id=4216696 bin=GWF2_OP9-related_38_17 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Tax=GWF2_RBX1_38_17_curated
putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
GWD2_RBX1_39_127_gwd2_scaffold_610_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7352..8191)
DNA (840bp) protein (280aa)
hypothetical protein VspiD_11005 id=1993264 bin=GWE2_RBX1_39_32 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
xylose isomerase Tax=GWF2_RBX1_38_17_curated
xylose isomerase
GWD2_RBX1_39_127_gwd2_scaffold_610_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8188..9636)
DNA (1449bp) protein (483aa)
hypothetical protein id=24610125 bin=RAAC11 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_610_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10072..10257
DNA (186bp) protein (62aa)
Putative uncharacterized protein id=1993262 bin=GWE2_RBX1_39_32 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_610_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10270..11469
DNA (1200bp) protein (400aa)
chromate ion transporter family chromate transporter; K07240 chromate transporter id=24610123 bin=RAAC11 species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
chromate ion transporter family chromate transporter; K07240 chromate transporter Tax=GWF2_RBX1_38_17_curated
chromate ion transporter family chromate transporter
GWD2_RBX1_39_127_gwd2_scaffold_610_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11537..11986
DNA (450bp) protein (150aa)
Rhodanese-like protein id=2063629 bin=GWD2_RBX1-related_39_127 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rhodanese-related sulfurtransferase Tax=GWF2_RBX1_38_17_curated
rhodanese-related sulfurtransferase
GWD2_RBX1_39_127_gwd2_scaffold_610_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12166..12741)
DNA (576bp) protein (192aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4216690 bin=GWF2_OP9-related_38_17 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
methylase involved in ubiquinone/menaquinone biosynthesis Tax=GWF2_RBX1_38_17_curated
methylase involved in ubiquinone/menaquinone biosynthesis
GWD2_RBX1_39_127_gwd2_scaffold_610_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(12755..13117)
DNA (363bp) protein (121aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis protein id=1993258 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_610_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(13296..13994)
DNA (699bp) protein (233aa)
Cytochrome c biogenesis protein id=2063632 bin=GWD2_RBX1-related_39_127 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ccdA; Cytochrome c biogenesis protein; K06196 cytochrome c-type biogenesis protein Tax=GWF2_RBX1_38_17_curated
ccdA; cytochrome c biogenesis protein
GWD2_RBX1_39_127_gwd2_scaffold_610_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(13996..14415)
DNA (420bp) protein (140aa)
Thioredoxin domain protein id=4216687 bin=GWF2_OP9-related_38_17 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
trxA; Thioredoxin domain protein; K03671 thioredoxin 1 Tax=GWF2_RBX1_38_17_curated
trxA; thioredoxin domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_610_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14415..14825)
DNA (411bp) protein (137aa)
DGC domain protein id=1993255 bin=GWE2_RBX1_39_32 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DGC domain-containing protein Tax=GWF2_RBX1_38_17_curated
DGC domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_610_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14848..15081)
DNA (234bp) protein (78aa)
Redox-active disulfide protein 2 id=2063650 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
redox-active disulfide protein 2 Tax=GWF2_RBX1_38_17_curated
redox-active disulfide protein 2
GWD2_RBX1_39_127_gwd2_scaffold_610_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(15108..16058)
DNA (951bp) protein (317aa)
Permease id=1993253 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
permease; K07089 Tax=GWF2_RBX1_38_17_curated
permease
GWD2_RBX1_39_127_gwd2_scaffold_610_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16094..16423)
DNA (330bp) protein (110aa)
Regulatory protein ArsR id=1993252 bin=GWE2_RBX1_39_32 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
regulatory protein ArsR Tax=GWF2_RBX1_38_17_curated
regulatory protein ArsR
GWD2_RBX1_39_127_gwd2_scaffold_610_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16660..18897)
DNA (2238bp) protein (746aa)
Methyl-accepting chemotaxis sensory transducer id=2063660 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWD2_RBX1_39_127_gwd2_scaffold_610_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19233..21251
DNA (2019bp) protein (673aa)
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=2063664 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWD2_RBX1_39_127_gwd2_scaffold_610_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21500..22363)
DNA (864bp) protein (288aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=GWF2_RBX1_38_17_curated
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 id=1993249 bin=GWE2_RBX1_39_32 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_610_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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22638..23513
DNA (876bp) protein (292aa)
Leucine-rich repeat protein id=1993210 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
leucine-rich repeat protein Tax=GWF2_RBX1_38_17_curated
leucine-rich repeat protein
Displaying 25 items

View Taxonomy