ggKbase home page

GWE2_Firmicute_51_13_gwe2_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_Firmicute_51_13_gwe2_scaffold_276_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

145..1347
DNA (1203bp) protein (401aa)
wapA5; tRNA3(Ser)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein id=1933328 bin=GWE2_Firmicute_51_13 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
putative cell wall associated protein Tax=GWF2_Firmicutes_51_9_curated
GWE2_Firmicute_51_13_gwe2_scaffold_276_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

1393..2067
DNA (675bp) protein (225aa)
Uncharacterized protein id=1933332 bin=GWE2_Firmicute_51_13 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(2974..3723)
DNA (750bp) protein (250aa)
Transcriptional regulator, GntR family id=1933338 bin=GWE2_Firmicute_51_13 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=GWF2_Firmicutes_51_9_curated
GntR family transcriptional regulator
GWE2_Firmicute_51_13_gwe2_scaffold_276_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(3728..4477)
DNA (750bp) protein (250aa)
UbiC transcription regulator-associated domain protein id=1933343 bin=GWE2_Firmicute_51_13 species=Eubacterium ventriosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=GWF2_Firmicutes_51_9_curated
GntR family transcriptional regulator
GWE2_Firmicute_51_13_gwe2_scaffold_276_5
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(4560..5711)
DNA (1152bp) protein (384aa)
proton/sugar symporter Tax=GWF2_Firmicutes_51_9_curated
Proton/sugar symporter LacY id=1933347 bin=GWE2_Firmicute_51_13 species=Listeria fleischmannii genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
proton/sugar symporter
GWE2_Firmicute_51_13_gwe2_scaffold_276_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(5715..6452)
DNA (738bp) protein (246aa)
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain id=1933349 bin=GWE2_Firmicute_51_13 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6663..7697
DNA (1035bp) protein (345aa)
Putative uncharacterized protein id=1933351 bin=GWE2_Firmicute_51_13 species=[Eubacterium] infirmum genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein; K07035 Tax=GWF2_Firmicutes_51_9_curated
PTS sugar transporter subunit IID
GWE2_Firmicute_51_13_gwe2_scaffold_276_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

7733..8323
DNA (591bp) protein (197aa)
Putative uncharacterized protein id=1933353 bin=GWE2_Firmicute_51_13 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

8313..10004
DNA (1692bp) protein (564aa)
SWIM zinc finger domain protein id=1933355 bin=GWE2_Firmicute_51_13 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

10219..12276
DNA (2058bp) protein (686aa)
Conserved membrane-spanning protein id=3668686 bin=GWF2_Firmicute_51_9 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
membrane protein Tax=GWF2_Firmicutes_51_9_curated
membrane protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_11
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(12338..13102)
DNA (765bp) protein (255aa)
Uncharacterized protein id=1933359 bin=GWE2_Firmicute_51_13 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
membrane protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(13099..14016)
DNA (918bp) protein (306aa)
ABC transporter, ATP-binding protein id=1933368 bin=GWE2_Firmicute_51_13 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
ABC transporter, ATP-binding protein Tax=GWF2_Firmicutes_51_9_curated
ABC transporter, ATP-binding protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(14013..14216)
DNA (204bp) protein (68aa)
Putative uncharacterized protein id=1933369 bin=GWE2_Firmicute_51_13 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_14
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(14226..15329)
DNA (1104bp) protein (368aa)
Transcriptional regulator, Cro/CI family id=1933370 bin=GWE2_Firmicute_51_13 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Transcriptional regulator, Cro/CI family Tax=GWF2_Firmicutes_51_9_curated
Transcriptional regulator, Cro/CI family rbh
GWE2_Firmicute_51_13_gwe2_scaffold_276_15
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists


15628..15837
DNA (210bp) protein (70aa)
50S ribosomal protein L31 id=1933375 bin=GWE2_Firmicute_51_13 species=[Clostridium] spiroforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
LSU ribosomal protein L31P Tax=GWF2_Firmicutes_51_9_curated
rpmE; 50S ribosomal protein L31
GWE2_Firmicute_51_13_gwe2_scaffold_276_16
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

15953..16549
DNA (597bp) protein (199aa)
tdk; thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21] Tax=GWF2_Firmicutes_51_9_curated
Thymidine kinase id=3668700 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
tdk; thymidine kinase
GWE2_Firmicute_51_13_gwe2_scaffold_276_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

16550..17926
DNA (1377bp) protein (459aa)
Putative uncharacterized protein id=1933383 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
multi antimicrobial extrusion protein MatE Tax=GWF2_Firmicutes_51_9_curated
multi antimicrobial extrusion protein MatE
GWE2_Firmicute_51_13_gwe2_scaffold_276_18
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

17939..19012
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 id=1933386 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
prfA; peptide chain release factor 1 Tax=GWF2_Firmicutes_51_9_curated
prfA; peptide chain release factor 1
GWE2_Firmicute_51_13_gwe2_scaffold_276_19
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19009..19863
DNA (855bp) protein (285aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase id=1933389 bin=GWE2_Firmicute_51_13 species=[Eubacterium] dolichum genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
prmC; protein-(glutamine-N5) methyltransferase
GWE2_Firmicute_51_13_gwe2_scaffold_276_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(19890..20288)
DNA (399bp) protein (133aa)
Helix-turn-helix domain protein id=1933392 bin=GWE2_Firmicute_51_13 species=Caldicellulosiruptor obsidiansis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
helix-turn-helix domain-containing protein Tax=GWF2_Firmicutes_51_9_curated
helix-turn-helix domain-containing protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_21
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

20423..20728
DNA (306bp) protein (102aa)
id=1933395 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
id=1933395 Tax=GWF2_Firmicutes_51_9_curated
GWE2_Firmicute_51_13_gwe2_scaffold_276_22
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

20841..21467
DNA (627bp) protein (209aa)
Putative uncharacterized protein id=1933396 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Sua5/YciO/YrdC/YwlC domain-containing protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=GWF2_Firmicutes_51_9_curated
Sua5/YciO/YrdC/YwlC domain-containing protein
GWE2_Firmicute_51_13_gwe2_scaffold_276_23
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

21464..21931
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=1933399 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
ribose-5-phosphate isomerase B Tax=GWF2_Firmicutes_51_9_curated
ribose-5-phosphate isomerase B
GWE2_Firmicute_51_13_gwe2_scaffold_276_24
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

21918..23141
DNA (1224bp) protein (408aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=GWF2_Firmicutes_51_9_curated
Serine hydroxymethyltransferase id=1933403 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
glyA; glycine hydroxymethyltransferase
GWE2_Firmicute_51_13_gwe2_scaffold_276_25
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

23158..23778
DNA (621bp) protein (207aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9) Tax=GWF2_Firmicutes_51_9_curated
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase id=3668760 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
GWE2_Firmicute_51_13_gwe2_scaffold_276_26
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

23862..24221
DNA (360bp) protein (120aa)
id=1933409 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
id=1933409 Tax=GWF2_Firmicutes_51_9_curated
GWE2_Firmicute_51_13_gwe2_scaffold_276_27
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

24223..24936
DNA (714bp) protein (238aa)
atpB; ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=GWF2_Firmicutes_51_9_curated
ATP synthase subunit a id=1933411 bin=GWE2_Firmicute_51_13 species=Eremococcus coleocola genus=Eremococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
atpB; ATP synthase F0 subunit A
GWE2_Firmicute_51_13_gwe2_scaffold_276_28
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

24956..25189
DNA (234bp) protein (78aa)
Putative uncharacterized protein id=3668763 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
ATP synthase F0 subunit C Tax=GWF2_Firmicutes_51_9_curated
atpE; ATP synthase F0 subunit C
GWE2_Firmicute_51_13_gwe2_scaffold_276_29
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

25221..25724
DNA (504bp) protein (168aa)
F0F1 ATP synthase subunit B (EC:3.6.3.14) Tax=GWF2_Firmicutes_51_9_curated
F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b id=3668764 bin=GWF2_Firmicute_51_9 species=Coprobacillus sp. 29_1 genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
GWE2_Firmicute_51_13_gwe2_scaffold_276_30
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

25724..26263
DNA (540bp) protein (180aa)
atpH; ATP synthase delta subunit (EC:3.6.3.14) Tax=GWF2_Firmicutes_51_9_curated
ATP synthase subunit delta id=1933419 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
ATP synthase F0F1 subunit delta
Displaying items 1-30 of 140 in total

View Taxonomy