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GWE2_Tenericutes_34_108_gwe2_scaffold_103

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_trna_7
unknown

Not on your lists

comp(201..284)
DNA (84bp)
transferRNA
GWE2_Tenericutes_34_108_gwe2_scaffold_103_1
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(317..1990)
DNA (1674bp) protein (558aa)
glycerone kinase (EC:2.7.1.29); K07030 Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Glycerone kinase (EC:2.7.1.29)
Glycerone kinase id=2828363 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_2
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists


2294..2482
DNA (189bp) protein (63aa)
50S ribosomal protein L28 id=3304444 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
rpmB; 50S ribosomal protein L28
GWE2_Tenericutes_34_108_gwe2_scaffold_103_3
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(2518..3123)
DNA (606bp) protein (202aa)
thi80; thiamine pyrophosphokinase (EC:2.7.6.2); K00949 thiamine pyrophosphokinase [EC:2.7.6.2] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
thi80; Thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase id=2828376 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_4
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(3120..3752)
DNA (633bp) protein (211aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=3304448 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
GWE2_Tenericutes_34_108_gwe2_scaffold_103_5
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(3763..4695)
DNA (933bp) protein (311aa)
RNA-binding GTPase (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Putative ribosome biogenesis GTPase RsgA id=3628084 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
rsgA; Putative ribosome biogenesis GTPase RsgA
GWE2_Tenericutes_34_108_gwe2_scaffold_103_6
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(4730..5749)
DNA (1020bp) protein (340aa)
radical SAM superfamily Fe-S oxidoreductase; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Probable dual-specificity RNA methyltransferase RlmN id=2828388 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
rlmN; Ribosomal RNA large subunit methyltransferase N
GWE2_Tenericutes_34_108_gwe2_scaffold_103_7
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists


comp(5818..8175)
DNA (2358bp) protein (786aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
pheT; Phenylalanyl-tRNA synthetase, beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit id=2828392 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_8
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists


comp(8172..9188)
DNA (1017bp) protein (339aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
pheS; Phenylalanyl-tRNA synthetase, alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit id=2828398 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_9
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(9437..10174)
DNA (738bp) protein (246aa)
Integral membrane protein id=2828405 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
integral membrane protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
predicted membrane protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_10
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(10218..14681)
DNA (4464bp) protein (1488aa)
polC; DNA polymerase III subunit alpha (EC:2.7.7.7); K03763 DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
polC; DNA polymerase III polC-type (PolIII) (EC:2.7.7.7)
DNA polymerase III PolC-type id=3628096 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
GWE2_Tenericutes_34_108_gwe2_scaffold_103_11
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(14678..15457)
DNA (780bp) protein (260aa)
id=2828415 bin=GWF1_Tenericute_35_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
id=2828415 Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
GWE2_Tenericutes_34_108_gwe2_scaffold_103_12
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

15527..16471
DNA (945bp) protein (315aa)
Fe-S oxidoreductase, radical SAM superfamily id=2828417 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
radical SAM superfamily Fe-S oxidoreductase; K07139 Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
hypothetical protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_13
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

16449..17000
DNA (552bp) protein (184aa)
Methyltransferase id=2828422 bin=GWF1_Tenericute_35_14 species=Streptococcus mitis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
methyltransferase Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Methyltransferase
GWE2_Tenericutes_34_108_gwe2_scaffold_103_14
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(17040..18119)
DNA (1080bp) protein (360aa)
Hypothetical surface-anchored protein id=2828429 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
hypothetical protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_15
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(18198..19274)
DNA (1077bp) protein (359aa)
Hypothetical surface-anchored protein id=2828475 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
hypothetical protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_16
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(19264..19788)
DNA (525bp) protein (175aa)
ECF subfamily RNA polymerase sigma-70 factor (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
ECF subfamily RNA polymerase sigma-70 factor (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily id=2828479 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_17
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists


comp(19895..22303)
DNA (2409bp) protein (803aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
leuS; Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase id=2828482 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
GWE2_Tenericutes_34_108_gwe2_scaffold_103_18
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(22396..22623)
DNA (228bp) protein (76aa)
acyl carrier protein; K02078 acyl carrier protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Acyl carrier protein id=2828484 bin=GWF1_Tenericute_35_14 species=unknown genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
acpP; similar to acyl carrier protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_19
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

22893..23696
DNA (804bp) protein (268aa)
ABC-type transport system, substrate-binding component id=2828486 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
ABC transporter substrate-binding protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Amino acid ABC transporter, amino acid-binding protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_20
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

23693..24379
DNA (687bp) protein (229aa)
ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
ABC-type transport system, permease component id=2828488 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Amino acid ABC transporter, permease
GWE2_Tenericutes_34_108_gwe2_scaffold_103_21
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

24363..25115
DNA (753bp) protein (251aa)
glutamate ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
ABC superfamily ATP binding cassette transporter, ABC protein id=3628120 bin=GWF2_Tenericutes_35_184 species=Staphylococcus aureus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Amino acid ABC transport, ATP-binding protein
GWE2_Tenericutes_34_108_gwe2_scaffold_103_22
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(25167..26219)
DNA (1053bp) protein (351aa)
glucan 1,3-beta-glucosidase; K01210 glucan 1,3-beta-glucosidase [EC:3.2.1.58] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Putative glucan 1,3-beta-glucosidase id=2828492 bin=GWF1_Tenericute_35_14 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Glycoside hydrolase, family 5
GWE2_Tenericutes_34_108_gwe2_scaffold_103_23
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(26203..27684)
DNA (1482bp) protein (494aa)
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
4-alpha-glucanotransferase id=2828493 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
malQ; putative 4-alpha-glucanotransferase
GWE2_Tenericutes_34_108_gwe2_scaffold_103_24
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(27681..29378)
DNA (1698bp) protein (566aa)
Alpha-amylase id=3304687 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
amyA4; alpha-amylase Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
malL; putative oligo-1,6-glucosidase
GWE2_Tenericutes_34_108_gwe2_scaffold_103_25
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

29495..31279
DNA (1785bp) protein (595aa)
amyA3; alpha-amylase (EC:3.2.1.1) Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Alpha-amylase id=2828495 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
nplT; putative Neopullulanase
GWE2_Tenericutes_34_108_gwe2_scaffold_103_26
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

31276..32250
DNA (975bp) protein (325aa)
Transcription regulator, LacI family id=2828496 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
LacI family transcription regulator; K02529 LacI family transcriptional regulator Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
LacI family transcription regulator
GWE2_Tenericutes_34_108_gwe2_scaffold_103_27
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(32289..34145)
DNA (1857bp) protein (619aa)
glgB; glycogen branching enzyme (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
glgB; glycogen branching enzyme (EC:2.4.1.18)
Glycogen branching enzyme id=3628138 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
GWE2_Tenericutes_34_108_gwe2_scaffold_103_28
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(34158..36116)
DNA (1959bp) protein (653aa)
alpha-amylase; K01200 pullulanase [EC:3.2.1.41] Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Alpha-amylase id=2828498 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
malS; Alpha amylase
GWE2_Tenericutes_34_108_gwe2_scaffold_103_29
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(36113..37405)
DNA (1293bp) protein (431aa)
amyA2; alpha-amylase (EC:3.2.1.1) Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
amyA2; alpha-amylase (EC:3.2.1.1)
Alpha-amylase id=2828499 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Displaying items 1-30 of 109 in total

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