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GWF2_OP3_43_52_gwf2_scaffold_480

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Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_OP3_43_52_gwf2_scaffold_480_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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2..271
DNA (270bp) protein (90aa)
Uncharacterized protein id=4236862 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Uncharacterized protein Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_480_2
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(344..1504)
DNA (1161bp) protein (387aa)
Transposase IS4 family protein id=4236863 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
transposase IS4 family protein Tax=GWF2_WOR_2_43_52_curated
transposase IS4 family protein
GWF2_OP3_43_52_gwf2_scaffold_480_3
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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1717..1905
DNA (189bp) protein (63aa)
id=4236865 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=4236865 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_480_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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2040..3152
DNA (1113bp) protein (371aa)
radical SAM protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=GWF2_WOR_2_43_52_curated
Radical SAM domain protein id=4236866 bin=GWF2_OP3_43_52 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM protein
GWF2_OP3_43_52_gwf2_scaffold_480_5
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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3091..4656
DNA (1566bp) protein (522aa)
AMMECR1 domain-containing protein; K06990 Tax=GWF2_WOR_2_43_52_curated
AMMECR1 domain protein id=4236868 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
AMMECR1 domain-containing protein
GWF2_OP3_43_52_gwf2_scaffold_480_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(4619..6763)
DNA (2145bp) protein (715aa)
spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWF2_WOR_2_43_52_curated
Spermidine synthase id=4236870 bin=GWF2_OP3_43_52 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
spermidine synthase
GWF2_OP3_43_52_gwf2_scaffold_480_7
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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6962..7708
DNA (747bp) protein (249aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=GWF2_WOR_2_43_52_curated
Ribosomal RNA small subunit methyltransferase E id=4236872 bin=GWF2_OP3_43_52 species=Dorea longicatena genus=Dorea taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_480_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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7763..9079
DNA (1317bp) protein (439aa)
MiaB family RNA modification protein (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] Tax=GWF2_WOR_2_43_52_curated
MiaB family RNA modification protein (EC:1.3.1.74)
RNA modification enzyme, MiaB family id=4735705 bin=GWC2_OP3_44_8 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
GWF2_OP3_43_52_gwf2_scaffold_480_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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9021..9131
DNA (111bp) protein (37aa)
id=4236877 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=4236877 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_480_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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9200..9781
DNA (582bp) protein (194aa)
id=4236879 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=4236879 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_480_11
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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9784..10731
DNA (948bp) protein (316aa)
Putative uncharacterized protein id=4236880 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_480_12
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

10889..12661
DNA (1773bp) protein (591aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=GWF2_WOR_2_43_52_curated
DNA primase id=4236882 bin=GWF2_OP3_43_52 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA primase
GWF2_OP3_43_52_gwf2_scaffold_480_13
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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12664..14226
DNA (1563bp) protein (521aa)
RNA polymerase sigma factor id=4236884 bin=GWF2_OP3_43_52 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=GWF2_WOR_2_43_52_curated
rpoD; RNA polymerase sigma factor rpoD
GWF2_OP3_43_52_gwf2_scaffold_480_trna_1
unknown

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14303..14373
DNA (71bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_480_14
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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14382..14801
DNA (420bp) protein (140aa)
Uncharacterized protein id=4735750 bin=GWC2_OP3_44_8 species=Candidatus Nitrosoarchaeum limnia genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
Secondary thiamine-phosphate synthase enzyme
GWF2_OP3_43_52_gwf2_scaffold_480_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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15140..15916
DNA (777bp) protein (259aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=GWF2_WOR_2_43_52_curated
Putative thymidylate synthase id=4236888 bin=GWF2_OP3_43_52 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
thymidylate synthase
GWF2_OP3_43_52_gwf2_scaffold_480_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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16128..17126
DNA (999bp) protein (333aa)
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWF2_WOR_2_43_52_curated
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=4236891 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_480_17
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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17128..17412
DNA (285bp) protein (95aa)
GIY-YIG nuclease superfamily protein id=4236893 bin=GWF2_OP3_43_52 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=GWF2_WOR_2_43_52_curated
excinuclease ABC C subunit domain-containing protein
GWF2_OP3_43_52_gwf2_scaffold_480_trna_2
unknown

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17635..17709
DNA (75bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_480_18
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

17924..18292
DNA (369bp) protein (123aa)
Chaperonin GroS id=4236895 bin=GWF2_OP3_43_52 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
groS1; chaperonin GroS Tax=GWF2_WOR_2_43_52_curated
groS1; chaperonin GroS
GWF2_OP3_43_52_gwf2_scaffold_480_19
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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18434..18793
DNA (360bp) protein (120aa)
id=4236897 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=4236897 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_480_20
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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18806..20101
DNA (1296bp) protein (432aa)
homoserine dehydrogenase (HDH): ThrA, MetL (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=GWF2_WOR_2_43_52_curated
homoserine dehydrogenase ThrA (EC:1.1.1.3)
Homoserine dehydrogenase id=4236898 bin=GWF2_OP3_43_52 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_480_21
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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20101..21177
DNA (1077bp) protein (359aa)
threonine synthase ; K01733 threonine synthase [EC:4.2.3.1] Tax=GWF2_WOR_2_43_52_curated
Threonine synthase id=4236900 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
threonine synthase
GWF2_OP3_43_52_gwf2_scaffold_480_22
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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21252..21893
DNA (642bp) protein (214aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=GWF2_W
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase id=4236902 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
GWF2_OP3_43_52_gwf2_scaffold_480_23
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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21884..22615
DNA (732bp) protein (244aa)
Cytoplasmic protein id=4236904 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_480_24
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

23099..23998
DNA (900bp) protein (300aa)
Putative uncharacterized protein id=4945817 bin=GWC2_OP3_44_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein; K06872 uncharacterized protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_480_25
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

24239..24796
DNA (558bp) protein (186aa)
Putative uncharacterized protein id=4237030 bin=GWF2_OP3_43_52 species=unknown genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
LemA family protein; K03744 LemA protein Tax=GWF2_WOR_2_43_52_curated
LemA family protein
GWF2_OP3_43_52_gwf2_scaffold_480_26
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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24915..26120
DNA (1206bp) protein (402aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=GWF2_WOR_2_43_52_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=4945815 bin=GWC2_OP3_44_8 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_480_27
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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26324..27544
DNA (1221bp) protein (407aa)
lysC; aspartokinase (EC:2.7.2.4) Tax=GWF2_WOR_2_43_52_curated
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase id=4945814 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
GWF2_OP3_43_52_gwf2_scaffold_480_28
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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27550..29115
DNA (1566bp) protein (522aa)
alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=GWF2_WOR_2_43_52_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=4945813 bin=GWC2_OP3_44_8 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
alpha-isopropylmalate/homocitrate synthase family transferase
Displaying items 1-30 of 139 in total

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