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GWF2_RBX1_38_17_gwf2_scaffold_2894

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2894_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1..150
DNA (150bp) protein (50aa)
id=3954376 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3954376 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2894_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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242..1261
DNA (1020bp) protein (340aa)
Glycosyl transferase family 2 id=3954377 bin=GWF2_OP9-related_38_17 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
family 2 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
family 2 glycosyl transferase
GWF2_RBX1_38_17_gwf2_scaffold_2894_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1426..2742
DNA (1317bp) protein (439aa)
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC id=24610052 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
RnfABCDGE type electron transport complex subunit C
GWF2_RBX1_38_17_gwf2_scaffold_2894_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2755..3753
DNA (999bp) protein (333aa)
Electron transport complex, RnfABCDGE type, D subunit id=2143397 bin=GWD2_RBX1-related_39_127 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit D
GWF2_RBX1_38_17_gwf2_scaffold_2894_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3746..4318
DNA (573bp) protein (191aa)
Electron transport complex protein id=2160296 bin=GWE2_RBX1_39_32 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rnfG; electron transport complex protein RnfG Tax=GWF2_RBX1_38_17_curated
nfoG; NfoG
GWF2_RBX1_38_17_gwf2_scaffold_2894_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4315..5022
DNA (708bp) protein (236aa)
Electron transport complex, RnfABCDGE type, E subunit id=2160297 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RnfABCDGE type electron transport complex subunit E; K03613 electron transport complex protein RnfE Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit E
GWF2_RBX1_38_17_gwf2_scaffold_2894_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5047..5628
DNA (582bp) protein (194aa)
Putative inner membrane subunit of an electron transport system id=2160298 bin=GWE2_RBX1_39_32 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rnfA; inner membrane subunit of an electron transport system; K03617 electron transport complex protein RnfA Tax=GWF2_RBX1_38_17_curated
rnfA; putative inner membrane subunit of an electron transport system
GWF2_RBX1_38_17_gwf2_scaffold_2894_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5659..6453
DNA (795bp) protein (265aa)
Electron transport complex, RnfABCDGE type, B subunit id=3954383 bin=GWF2_OP9-related_38_17 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RnfABCDGE type electron transport complex subunit B Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit B
GWF2_RBX1_38_17_gwf2_scaffold_2894_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6484..7095
DNA (612bp) protein (204aa)
V-type ATP synthase subunit E; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase subunit E id=2143387 bin=GWD2_RBX1-related_39_127 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
V-type ATP synthase subunit E
GWF2_RBX1_38_17_gwf2_scaffold_2894_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7088..7594
DNA (507bp) protein (169aa)
Uncharacterized protein BB_0095 id=2160301 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2894_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7575..9299
DNA (1725bp) protein (575aa)
V-type ATP synthase subunit alpha (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase subunit alpha (EC:3.6.3.14)
V-type ATP synthase alpha chain id=2143383 bin=GWD2_RBX1-related_39_127 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_2894_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9299..10603
DNA (1305bp) protein (435aa)
V-type ATP synthase subunit B; K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase beta chain id=3954469 bin=GWF2_OP9-related_38_17 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
V-type ATP synthase subunit B
GWF2_RBX1_38_17_gwf2_scaffold_2894_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10613..11221
DNA (609bp) protein (203aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATPase, D subunit id=2160304 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
V-type ATPase subunit D
GWF2_RBX1_38_17_gwf2_scaffold_2894_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11224..13044
DNA (1821bp) protein (607aa)
V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2160305 bin=GWE2_RBX1_39_32 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATPase V
GWF2_RBX1_38_17_gwf2_scaffold_2894_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13072..13512
DNA (441bp) protein (147aa)
V-type ATP synthase subunit K; K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2143378 bin=GWD2_RBX1-related_39_127 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
V-type ATP synthase subunit K
GWF2_RBX1_38_17_gwf2_scaffold_2894_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13590..14294
DNA (705bp) protein (235aa)
Glutamine amidotransferase class-I id=2143377 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glutamine amidotransferase Tax=GWF2_RBX1_38_17_curated
glutamine amidotransferase
GWF2_RBX1_38_17_gwf2_scaffold_2894_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14415..16298
DNA (1884bp) protein (628aa)
NADH dehydrogenase (quinone) id=2160310 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit
GWF2_RBX1_38_17_gwf2_scaffold_2894_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16295..17146
DNA (852bp) protein (284aa)
ech hydrogenase subunit B id=3954475 bin=GWF2_OP9-related_38_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
formate hydrogenlyase subunit 4 Tax=GWF2_RBX1_38_17_curated
formate hydrogenlyase subunit 4
GWF2_RBX1_38_17_gwf2_scaffold_2894_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17164..17595
DNA (432bp) protein (144aa)
NADH ubiquinone oxidoreductase 20 kDa subunit id=2160314 bin=GWE2_RBX1_39_32 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Ni,Fe-hydrogenase III small subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III small subunit
GWF2_RBX1_38_17_gwf2_scaffold_2894_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17618..18016
DNA (399bp) protein (133aa)
NADH dehydrogenase (Ubiquinone), 30 kDa subunit id=3954477 bin=GWF2_OP9-related_38_17 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
NADH:ubiquinone oxidoreductase 27 kD subunit Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase 27 kD subunit
GWF2_RBX1_38_17_gwf2_scaffold_2894_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18020..19099
DNA (1080bp) protein (360aa)
NADH-ubiquinone oxidoreductase chain 49kDa id=2143370 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Ni,Fe-hydrogenase III large subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III large subunit
GWF2_RBX1_38_17_gwf2_scaffold_2894_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19109..19429
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin id=2143342 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
NADH:ubiquinone oxidoreductase chain I-like protein Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase chain I-like protein
GWF2_RBX1_38_17_gwf2_scaffold_2894_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19541..22024
DNA (2484bp) protein (828aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_RBX1_38_17_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=2160322 bin=GWE2_RBX1_39_32 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2894_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22308..22589)
DNA (282bp) protein (94aa)
id=24610031 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610031 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2894_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22979..25081)
DNA (2103bp) protein (701aa)
multi-sensor signal transduction multi-kinase Tax=GWF2_RBX1_38_17_curated
Multi-sensor signal transduction multi-kinase id=2160325 bin=GWE2_RBX1_39_32 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction multi-kinase
GWF2_RBX1_38_17_gwf2_scaffold_2894_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(25188..25718)
DNA (531bp) protein (177aa)
id=2160327 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2160327 Tax=GWF2_RBX1_38_17_curated
Displaying 26 items

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