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GWF2_RBX1_38_17_gwf2_scaffold_10615

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_10615_trna_2
unknown

Not on your lists

comp(245..317)
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_10615_trna_1
unknown

Not on your lists

comp(353..425)
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_10615_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(457..1290)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=2097751 bin=GWD2_RBX1-related_39_127 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K06864 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_10615_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1394..1669)
DNA (276bp) protein (92aa)
id=1961813 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1961813 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_10615_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1783..2790)
DNA (1008bp) protein (336aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=GWF2_RBX1_38_17_curated
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=1961814 bin=GWE2_RBX1_39_32 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_10615_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2792..3244)
DNA (453bp) protein (151aa)
N-acetylglutamate synthase id=1961817 bin=GWE2_RBX1_39_32 species=Methanolobus psychrophilus genus=Methanolobus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-acetylglutamate synthase Tax=GWF2_RBX1_38_17_curated
N-acetylglutamate synthase
GWF2_RBX1_38_17_gwf2_scaffold_10615_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3367..5400)
DNA (2034bp) protein (678aa)
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWF2_RBX1_38_17_curated
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase id=1961821 bin=GWE2_RBX1_39_32 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_10615_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5487..6398)
DNA (912bp) protein (304aa)
Uncharacterized protein id=1961824 bin=GWE2_RBX1_39_32 species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_10615_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6439..6798)
DNA (360bp) protein (120aa)
Rna binding protein id=1961827 bin=GWE2_RBX1_39_32 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rpbA; putative RNA-binding protein RbpA Tax=GWF2_RBX1_38_17_curated
rpbA; putative RNA-binding protein RbpA
GWF2_RBX1_38_17_gwf2_scaffold_10615_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7040..7396)
DNA (357bp) protein (119aa)
Rna binding protein id=2685740 bin=GWF2_OP9-related_38_17 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RNA-binding domain-containing protein Tax=GWF2_RBX1_38_17_curated
RNA-binding domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_10615_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7961..8050)
DNA (90bp) protein (30aa)
two component system sensor histidine kinase (EC:2.7.13.3) id=24611056 bin=RAAC11 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
two component system sensor histidine kinase (EC:2.7.13.3) Tax=GWF2_RBX1_38_17_curated
Displaying 11 items

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