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RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9

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Displaying items 1-30 of 100 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..1885
DNA (1200bp) protein (400aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV86_PARL1
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl-CoA dehydrogenase domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..2764)
DNA (759bp) protein (253aa)
Cyclase family protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U486_OCEP5
cyclase family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
cyclase family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_3
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2904..3665)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00036EA62F
short chain dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
short chain dehydrogenase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3960..6131
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Cladophialophora carrionii CBS 160.54 RepID=V9D6Y3_9EURO
dipeptidyl aminopeptidase; K06978 Tax=RBG_13_Deltaproteobacteria_43_22_curated
dipeptidyl aminopeptidase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6312..7274
DNA (963bp) protein (321aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT7_PARL1
alcohol dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
alcohol dehydrogenase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7636..8124
DNA (489bp) protein (163aa)
Thioesterase superfamily protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CPW9_SYNLT
thioesterase superfamily protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
thioesterase superfamily protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8276..9232
DNA (957bp) protein (319aa)
hypothetical protein; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N243_ANATU
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..9526)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B39E12
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9558..10439)
DNA (882bp) protein (294aa)
Beta-lactamase domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBQ5_DESAA
beta-lactamase domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
beta-lactamase domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10805..11755)
DNA (951bp) protein (317aa)
sterol-binding domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
NAD(P)H dehydrogenase (Quinone) id=3072624 bin=GWB1_CP_36_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
sterol-binding domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11793..12740)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362ED92
amidohydrolase 2; K07045 Tax=RBG_13_Deltaproteobacteria_43_22_curated
amidohydrolase 2
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13036..13341)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TNJ5_METAC
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_13
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13544..13990
DNA (447bp) protein (149aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMG3_DESB2
response regulator receiver protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
response regulator receiver protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14136..15722
DNA (1587bp) protein (529aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMG6_DESB2
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
PAS/PAC sensor signal transduction histidine kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15680..15973)
DNA (294bp) protein (98aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16542..17888
DNA (1347bp) protein (449aa)
Trk system potassium uptake protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX97_SYNAS
trkA; potassium transporter peripheral membrane component; K03499 trk system potassium uptake protein TrkA Tax=RBG_13_Deltaproteobacteria_43_22_curated
trkA; potassium transporter peripheral membrane component
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17885..19375
DNA (1491bp) protein (497aa)
Trk system potassium uptake protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX96_SYNAS
trk system potassium uptake protein; K03498 trk system potassium uptake protein TrkH Tax=RBG_13_Deltaproteobacteria_43_22_curated
trk system potassium uptake protein rbh
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19647..20888)
DNA (1242bp) protein (414aa)
Extracellular ligand-binding receptor n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JSQ0_9THEM
branched-chain amino acid ABC transporter substrate-binding protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
branched-chain amino acid ABC transporter substrate-binding protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21369..22112)
DNA (744bp) protein (248aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22598..23089)
DNA (492bp) protein (164aa)
Rubrerythrin n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U0N0_DESML
rbr3; rubrerythrin Tax=RBG_13_Deltaproteobacteria_43_22_curated
rbr3; rubrerythrin
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23409..25019)
DNA (1611bp) protein (537aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIL5_9BACT
transcriptional regulator Tax=RBG_13_Deltaproteobacteria_43_22_curated
transcriptional regulator
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_22
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25195..26019)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A2V9_9RALS
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26016..27167)
DNA (1152bp) protein (384aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Restriction modification system DNA specificity domain-containing protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JE97_DESDE
restriction modification system DNA specificity domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_24
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27164..28672)
DNA (1509bp) protein (503aa)
type I restriction-modification system specificity subunit (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit HsdM id=4432096 bin=GWF2_Ignavibacteria_35_20 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_25
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28689..31130)
DNA (2442bp) protein (814aa)
type III restriction endonuclease subunit R n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003781D11
type III restriction protein res subunit Tax=RBG_13_Deltaproteobacteria_43_22_curated
type III restriction protein res subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_26
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31451..32110)
DNA (660bp) protein (220aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Ribulose-phosphate 3-epimerase id=3203733 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rpe; ribulose-phosphate 3-epimerase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32286..33641)
DNA (1356bp) protein (452aa)
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Sun protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEK0_SYNFM
sun protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33649..34599)
DNA (951bp) protein (317aa)
Fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Methionyl-tRNA formyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=FMT_PELTS
Fmt; methionyl-tRNA formyltransferase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_29
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34656..34856
DNA (201bp) protein (67aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_9_30
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34871..35383)
DNA (513bp) protein (171aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Peptide deformylase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDE6_9DELT
peptide deformylase
Displaying items 1-30 of 100 in total

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