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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8..328)
DNA (321bp) protein (107aa)
Nucleoid-associated protein Atc_1303 n=2 Tax=Acidithiobacillus caldus RepID=F9ZNX1_ACICS
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..1880)
DNA (1545bp) protein (515aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RBG_16_Gamma2_65_34_curated
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037F5A0A
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2203..2409)
DNA (207bp) protein (69aa)
Ribonuclease VapC n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETM1_METSB
PilT protein domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PilT protein domain-containing protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2592..2822)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y865_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2883..3809)
DNA (927bp) protein (309aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
MORN motif-containing protein id=1817569 bin=GWD2_Nitrospirae-related_57_8 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
MORN motif precursor
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3934..4959)
DNA (1026bp) protein (342aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
50S ribosomal protein L21 id=1817570 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
LSU ribosomal protein L21p
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_trna_2
unknown

Not on your lists

comp(5234..5322)
DNA (89bp)
transferRNA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5415..6449)
DNA (1035bp) protein (345aa)
Cyclic nucleotide-binding protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HXX6_9GAMM
cyclic nucleotide-binding protein Tax=RBG_16_Gamma2_65_34_curated
Cyclic nucleotide-binding domain-containing protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_trna_1
unknown

Not on your lists

comp(6567..6652)
DNA (86bp)
transferRNA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7471..8904
DNA (1434bp) protein (478aa)
transglycosylase n=1 Tax=Methylobacter marinus RepID=UPI0003788D27
transglycosylase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lytic transglycosylase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9009..9440)
DNA (432bp) protein (144aa)
CMP/dCMP deaminase protein; K11991 tRNA-specific adenosine deaminase [EC:3.5.4.-] Tax=RBG_16_Gamma2_65_34_curated
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQ04_ALLVD
zinc-binding protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9563..11134)
DNA (1572bp) protein (524aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=GUAA_METCA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_11
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11215..12672)
DNA (1458bp) protein (486aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60C20_METCA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12834..13136
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13206..14441
DNA (1236bp) protein (412aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AAU0_ALKEH
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_14
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14598..15449
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380F892
M24/M37 family peptidase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Membrane protein/metalloendopeptidase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_15
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16127..18226)
DNA (2100bp) protein (700aa)
Serine/threonine-protein kinase-like domain-containing protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8T5_9RHIZ
serine/threonine-protein kinase-like domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
serine/threonine-protein kinase-like domain-containing protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_16
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18531..19895)
DNA (1365bp) protein (455aa)
GTPase Der n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BXK7_9GAMM
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
GTP-binding protein EngA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20009..21160)
DNA (1152bp) protein (384aa)
Outer membrane protein assembly factor BamB n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCS4_9GAMM
Outer membrane protein YfgL Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Outer membrane protein YfgL
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_13736_18
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21157..21795)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Putative membrane protein id=1373442 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Displaying 20 items

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