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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3..419
DNA (417bp) protein (139aa)
pilus assembly protein PilP n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4C229
pilus assembly protein PilP Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilus assembly protein PilP (fragment)
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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451..3045
DNA (2595bp) protein (865aa)
Type IV pilus biogenesis protein PilQ n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XEV1_METNJ
Type IV pilus biogenesis protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
type IV pilus biogenesis protein PilQ
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3091..3627
DNA (537bp) protein (179aa)
shikimate kinase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F5D747
shikimate kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
shikimate kinase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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3614..4699
DNA (1086bp) protein (362aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
3-dehydroquinate synthase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380F7BC
3-dehydroquinate synthase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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4958..6088
DNA (1131bp) protein (377aa)
dgt_[C]; Deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1) Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035CC9BD
dgt1; deoxyguanosinetriphosphate triphosphohydrolase-like protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_6

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6155..7594
DNA (1440bp) protein (480aa)
Transposase of ISCARN96, IS1182 family n=1 Tax=mine drainage metagenome RepID=E6QR18_9ZZZZ
Transposase of ISCARN96, IS1182 family {ECO:0000313|EMBL:CBI09689.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tnp15; IS4 family transposase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_7
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7610..8026)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein id=12494559 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8157..8819)
DNA (663bp) protein (221aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADT8_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
protein-L-isoaspartate(D-aspartate) O-methyltransferase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_9
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9221..11110
DNA (1890bp) protein (630aa)
Phosphomethylpyrimidine synthase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BUU2_9GAMM
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RBG_16_Gamma2_64_11_curated
thiamine biosynthesis protein ThiC
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11221..12351
DNA (1131bp) protein (377aa)
ATPase AAA; K07133 Tax=RBG_16_Betaproteobacteria_58_11_curated
ATPase (AAA+ superfamily)-like protein id=4025051 bin=GWA2_Deltaproteo_65_63 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
ATPase AAA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_11
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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12367..12660
DNA (294bp) protein (98aa)
Transcriptional regulator, XRE family n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E3N2_9GAMM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EGZ48502.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source
predicted transcriptional regulator
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13266..13673
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VNK6_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_13
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13762..15612
DNA (1851bp) protein (617aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=RBG_16_Gammaproteobacteria_62_13__curated
ATP-dependent DNA helicase RecQ n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G376_9GAMM
ATP-dependent DNA helicase RecQ rbh
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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15785..15949
DNA (165bp) protein (55aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Uncharacterized protein id=2099819 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_15
unknown

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15951..16223
DNA (273bp) protein (91aa)

This feature has no annotations

RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_11869_16
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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16290..17453
DNA (1164bp) protein (388aa)
NnrS family protein; K07234 uncharacterized protein involved in response to NO Tax=GWA2_Rhodocyclales_65_20_curated
NnrS family protein id=1767520 bin=GWE2_Gallionellales_58_10 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Displaying 16 items

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