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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31..1311)
DNA (1281bp) protein (427aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGL7_9PROT
UDP-N-acetyl-D-mannosaminuronate dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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1462..3141
DNA (1680bp) protein (560aa)
GTPase n=1 Tax=Marinobacter sp. EN3 RepID=U7HL21_9ALTE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2965..3402)
DNA (438bp) protein (146aa)
carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3720..4517)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI000371ABA9
suhB1; myo-inositol-1(or 4)-monophosphatase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
inositol monophosphatase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4616..5326
DNA (711bp) protein (237aa)
TrmH family RNA methyltransferase; K15396 tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RNA methyltransferase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D74866
RNA methyltransferase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5514..6305
DNA (792bp) protein (264aa)
Serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Serine O-acetyltransferase (EC:2.3.1.30)
serine O-acetyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036713B8
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6364..6819
DNA (456bp) protein (152aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3R5_NITHN
iron-sulfur cluster assembly transcription factor IscR; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
iron-sulfur cluster assembly transcription factor IscR
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6840..7976
DNA (1137bp) protein (379aa)
Cysteine desulfurase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABX2_9PROT
cysteine desulfurase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
cysteine desulfurase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8008..9222
DNA (1215bp) protein (405aa)
cysteine desulfurase IscS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Cysteine desulfurase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHA5_9GAMM
aminotransferase, class V
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9333..9740
DNA (408bp) protein (136aa)
FeS cluster assembly scaffold IscU n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000371F163
FeS cluster assembly scaffold IscU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
FeS cluster assembly scaffold IscU
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_11
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9752..10075
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WXD0_METML
iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
iron-sulfur cluster assembly protein IscA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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10092..10622
DNA (531bp) protein (177aa)
CoA-transferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037A5DDD
co-chaperone HscB; K04082 molecular chaperone HscB Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
co-chaperone HscB
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..12570
DNA (1902bp) protein (634aa)
Chaperone protein HscA homolog n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTP1_THISH
2-alkenal reductase; K04044 molecular chaperone HscA Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
2-alkenal reductase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_14
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12567..13118
DNA (552bp) protein (184aa)
FeS cluster assembly scaffold IscU n=2 Tax=sulfur-oxidizing symbionts RepID=G2DEA8_9GAMM
ferredoxin 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
2Fe-2S ferredoxin
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_15
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13471..13902
DNA (432bp) protein (144aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase n=1 Tax=Thioalkalivibrio RepID=UPI000365ED89
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_16
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13910..15010
DNA (1101bp) protein (367aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ51_NITHN
radical SAM protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15007..15786
DNA (780bp) protein (260aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6W5_9GAMM
type IV pilus biogenesis/stability protein PilW; K02656 type IV pilus assembly protein PilF Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
type IV pilus biogenesis/stability protein PilW
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_18
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15790..16611
DNA (822bp) protein (274aa)
Transcriptional regulator n=1 Tax=Thauera sp. 28 RepID=N6ZJK3_9RHOO
hypothetical protein; K15539 cytoskeleton protein RodZ Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
XRE family transcriptional regulator
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_19
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16658..17725
DNA (1068bp) protein (356aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T1P8_9GAMM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21137_20
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17766..18998
DNA (1233bp) protein (411aa)
Histidine--tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
histidyl-tRNA synthetase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000372CFDD
histidyl-tRNA synthase
Displaying 20 items

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