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RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_1
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(83..2488)
DNA (2406bp) protein (802aa)
ddlA; D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
ddlA; D-alanine--D-alanine ligase id=5097102 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
ddlA; D-alanine--D-alanine ligase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_2
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2586..3332)
DNA (747bp) protein (249aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=5091452 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
peptidase M24
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_3
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3335..4456)
DNA (1122bp) protein (374aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=5227116 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_4
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(4466..5017)
DNA (552bp) protein (184aa)
Ribosome recycling factor {ECO:0000313|EMBL:KKS04366.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
ribosome recycling factor; K02838 ribosome recycling factor id=5227117 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ribosome recycling factor
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_5
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5037..5801)
DNA (765bp) protein (255aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=5803600 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_6
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5865..6878)
DNA (1014bp) protein (338aa)
Cell-shape determining protein {ECO:0000313|EMBL:KKS23978.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
id=5227119 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
MreB/Mrl family cell shape determining protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_7
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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6915..8861
DNA (1947bp) protein (649aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW18_9BACT
primosomal protein N'
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_8
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8907..9134
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS23980.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_9
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9197..9919)
DNA (723bp) protein (241aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=5803064 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_10
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(9995..10444)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYJ7_9BACT
ATP synthase epsilon chain {ECO:0000313|EMBL:KKS23982.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
ATP synthase subunit epsilon
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_11
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(10519..11874)
DNA (1356bp) protein (452aa)
ATP synthase F0F1 subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW0_9BACT
ATP synthase subunit beta {ECO:0000313|EMBL:KKS04371.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
ATP synthase F1 subunit beta
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_12
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11969..12892)
DNA (924bp) protein (308aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase F0F1 subunit gamma n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT1_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_13
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12864..14384)
DNA (1521bp) protein (507aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000313|EMBL:KKS04373.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=5227032 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_14
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14381..14779)
DNA (399bp) protein (133aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase F1 subunit delta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVY0_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_15
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(14776..15240)
DNA (465bp) protein (155aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=5227034 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP synthase subunit b {ECO:0000313|EMBL:KKS04375.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
ATP synthase F0 subunit B
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_16
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15395..15604)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS23259.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
putative F0F1-type ATPase subunit C
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_17
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15615..16463)
DNA (849bp) protein (283aa)
ATP synthase subunit a {ECO:0000313|EMBL:KKS23260.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
ATP synthase subunit a id=5227036 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP synthase F0 subunit A
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_18
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(16903..17223)
DNA (321bp) protein (107aa)
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:KKS04378.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RNP-1 like RNA-binding protein id=3886557 bin=GWF2_OP9-related_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RNP-1 like RNA-binding protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_19
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17360..17653)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_20
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17650..17994)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS23263.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Putative uncharacterized protein id=4731970 bin=GWC2_OD1_43_27 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_21
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(18025..18837)
DNA (813bp) protein (271aa)
Peptide chain release factor 1 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW7_9BACT
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_22
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(18957..19175)
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVU1_9BACT
50S ribosomal protein L31 {ECO:0000313|EMBL:KKS23265.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
rpmE; 50S ribosomal protein L31 RpmE
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_23
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19205..20539)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX56_9BACT
Peptidase M23 {ECO:0000313|EMBL:KKS23266.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
metalloendopeptidase-like membrane protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_24
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(20574..21272)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVZ1_9BACT
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
rplY; 50S ribosomal protein L25
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_25
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21309..23222)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000370933F
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:KKS04385.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
Oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_26
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23556..23873)
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_27
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23875..24879)
DNA (1005bp) protein (335aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Fructose-bisphosphate aldolase id=2512138 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
fructose-bisphosphate aldolase class-I
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_28
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24876..26351)
DNA (1476bp) protein (492aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit B {ECO:0000313|EMBL:KKS04388.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=5227058 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glutamyl-tRNA(Gln) amidotransferase subunit B
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_29
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26355..27350)
DNA (996bp) protein (332aa)
GTPase obg {ECO:0000313|EMBL:KKS23635.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
obgE; GTPase ObgE; K03979 GTP-binding protein id=5227188 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative GTP-binding protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_5829_30
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(27353..28261)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ04_9BACT
Metal-dependent protein hydrolase {ECO:0000313|EMBL:KKS23636.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
metal-dependent protein hydrolase
Displaying items 1-30 of 34 in total

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